Fitness data for b1516 in Escherichia coli BW25113

lsrB: AI2 transporter (NCBI)
SEED: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
KEGG: AI-2 transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
mixed community control; abiotic network mixed community control; abiotic network -5.0 -3.1 compare
stress Trimethoprim 0.005 mM -1.9 -2.3 compare
control PBS_cage_1_mice _Feces_16 hr -1.6 -2.3 compare
phage T7_phage 0.00015625 MOI TC4 -1.6 -1.9 compare
stress Ciprofloxacin Hydrochloride 0.000156 mM -1.5 -2.4 compare
phage T7_phage 0.0015625 MOI TC2 -1.5 -1.1 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -1.2 -2.0 compare
stress Ciprofloxacin Hydrochloride 0.0024 mM -1.2 -1.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -1.1 -2.6 compare
stress Chloramphenicol 0.0025 mg/ml -1.1 -2.7 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.0 -3.1 compare
phage Ste41 -1.0 -1.2 compare
control PBS_cage_2_mice _Feces_16 hr +1.0 +3.1 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +1.0 +2.2 compare
stress Cisplatin 0.1 mg/ml +1.0 +2.1 compare
carbon source carbon source D-Mannose 0.5mM +1.0 +2.9 compare
motility outer cut, LB soft agar motility assay +1.0 +2.1 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM +1.1 +2.6 compare
phage PoolT9D30 +1.2 +1.9 compare
no phage control NophageCTRA12 +1.2 +2.5 compare