Fitness data for b1501 in Escherichia coli BW25113

YdeP: putative oxidoreductase, major subunit, acid resistance protein (Katherine Huang)
SEED: Putative formate dehydrogenase oxidoreductase protein
KEGG: formate dehydrogenase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Trimethoprim 0.005 mM -1.1 -2.4 compare
stress LB Anaerobic with Ampicillin 0.00000195313 mM -0.7 -3.4 compare
phage T7_phage 0.00015625 MOI TC3 -0.6 -1.5 compare
phage T7_phage 0.0015625 MOI TC2 -0.6 -1.6 compare
carbon source carbon source D-Mannose 0.5mM -0.6 -2.2 compare
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM -0.5 -2.6 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.5 -1.8 compare
stress LB Aerobic with Oxytetracycline 0.00000125 mM -0.5 -2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.4 -1.7 compare
balo Mixed culture, Halobacteriovorax-1 +0.4 +2.4 compare
phage RB68 +0.5 +2.4 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.5 +2.4 compare
stress Cisplatin 0.05 mg/ml +0.5 +3.0 compare
phage Koxy_100 +0.5 +3.4 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.5 +1.7 compare
carbon source carbon source D-Mannose 0.5mM +0.5 +2.0 compare
control PBS_cage_1_mice _Feces_16 hr +0.6 +2.2 compare
msc 22hr_mediaonly_rep1_lowinoculum +0.6 +3.1 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.6 +2.5 compare
phage RB68 +0.7 +3.8 compare