Fitness data for b1496 in Escherichia coli BW25113

yddA: fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI)
SEED: Hypothetical ABC transporter ATP-binding protein yddA
KEGG: putative ATP-binding cassette transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Ciprofloxacin Hydrochloride 0.0024 mM -1.2 -4.3 compare
carbon source carbon source D-Mannose 5mM -1.0 -3.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.0 -3.7 compare
carbon source carbon source D-Glucose 5mM -1.0 -2.9 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.8 -3.2 compare
phage Bas73 -0.8 -3.7 compare
phage Phage_N4_cage_4_mouse_2_Cecum_40 hr -0.8 -2.8 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.7 -4.7 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:1 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan -0.7 -4.3 compare
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.7 -2.1 compare
balo Mixed culture, Halobacteriovorax-10 -0.7 -2.0 compare
stress LB Aerobic with Spiramycin 0.0000625 mM -0.7 -2.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.7 -3.8 compare
phage RB51m1 +0.7 +2.3 compare
no phage control NophageCTRB12 +0.7 +2.4 compare
phage N4_phage 0.009375 MOI TC2 +0.9 +2.7 compare
phage PoolT9D30 +0.9 +2.9 compare
phage Papa dilution 10-1 cacl2 maltose +1.0 +4.5 compare
phage Ste41 +1.2 +5.5 compare
stress Trimethoprim 0.005 mM +1.4 +2.1 compare