Fitness data for b1487 in Escherichia coli BW25113

ddpA: D-ala-D-a la transporter subunit (NCBI)
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.8 -3.4 compare
phage RhdML5 -1.7 -2.0 compare
phage T7_phage 0.00015625 MOI TC4 -1.3 -2.2 compare
no phage control NophageCTRB12 -1.3 -3.3 compare
stress Benzalkonium Chloride 0.004 mg/ml -1.1 -2.1 compare
phage Ste41 -1.0 -1.5 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.9 -1.3 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.9 -2.6 compare
mixed community control mixed community control -0.9 -1.4 compare
phage N4_phage 0.09375 MOI TC1 -0.8 -2.3 compare
phage Mnm2 -0.8 -1.6 compare
phage N4_phage 0.00009375 MOI TC4 -0.8 -1.6 compare
phage Δdbn_10 +0.8 +1.9 compare
stress 3-methyl-1-butanol 1.25 vol% +0.8 +2.3 compare
stress 3-methyl-1-butanol 1.25 vol% +0.8 +1.4 compare
no phage control CTR +0.8 +1.5 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM +0.9 +2.3 compare
control PBS_cage_2_mice _Feces_16 hr +1.0 +2.3 compare
stress Trimethoprim 0.005 mM +1.0 +1.3 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +1.3 +2.0 compare