Fitness data for b1484 in Escherichia coli BW25113

ddpD: D-ala-D-ala transporter subunit (NCBI)
SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Putative hemine transporter ATP-binding subunit
KEGG: peptide/nickel transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Nickel (II) chloride 1 mM -0.7 -2.9 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.7 -1.3 compare
stress Dimethyl Sulfoxide 10 vol% -0.7 -1.9 compare
stress 2-Furfuraldehyde 0.125 vol% -0.6 -2.8 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.6 -1.9 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.6 -1.3 compare
motility outer cut, LB soft agar motility assay -0.6 -1.5 compare
nophagecontrol T4_T1_phage0 +0.5 +1.7 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +0.6 +1.3 compare
nopredatorcontrol 3 hr NoPredatorControl +0.6 +2.7 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.6 +2.3 compare
stress LB Anaerobic with Ampicillin 0.00000195313 mM +0.6 +2.0 compare
drt_type_3 DRT_type_3 +0.6 +1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.7 +1.5 compare
stress LB Aerobic with Ramoplanin 0.000125 mM +0.7 +4.0 compare
control PBS_cage_1_mice _Feces_22 hr +0.7 +2.4 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +0.8 +2.2 compare
control PBS_cage_1_mice _Feces_16 hr +0.9 +2.4 compare
fishing LB+Gent outgrowth of mutant library after 1 day conjugation with donor carrying pRH22 VcDART vector +1.0 +1.1 compare
control PBS_cage_1_mice _Feces_40 hr +1.0 +4.6 compare