Fitness data for b1440 in Escherichia coli BW25113

ydcS: predicted spermidine/putrescine transporter subunit (NCBI)
SEED: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage T7_phage 0.00015625 MOI TC3 -1.0 -2.4 compare
motility outer cut, LB soft agar motility assay -0.8 -3.3 compare
phage Ste41 -0.6 -1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6 -2.4 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.5 -1.7 compare
phage N4_phage 0.00009375 MOI TC5 -0.5 -2.0 compare
stress Tetracycline 0.0004 mg/ml -0.4 -2.1 compare
stress Bacitracin 1 mg/ml -0.4 -1.8 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.4 -1.9 compare
phage T7_phage 0.0015625 MOI TC2 -0.4 -0.8 compare
carbon source carbon source D-Glucose 0.25mM +0.4 +1.7 compare
phage R2_N4_T2_phage8 +0.4 +2.3 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.4 +1.2 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.4 +1.3 compare
carbon source carbon source D-Glucose 5mM +0.5 +1.3 compare
stress toluene 2.5 vol% +0.5 +2.0 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.5 +1.6 compare
motility inner cut, LB soft agar motility assay +0.5 +1.0 compare
stress Cisplatin 0.1 mg/ml +0.5 +1.9 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.8 +2.9 compare