Fitness data for b1399 in Escherichia coli BW25113

paaX: DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI)
SEED: Phenylacetic acid degradation operon negative regulatory protein PaaX
KEGG: phenylacetic acid degradation operon negative regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage RhdML5 -2.6 -3.4 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON -2.2 -2.2 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -2.0 -1.8 compare
carbon source carbon source D-Glucose 0.25mM -1.9 -1.7 compare
phage HSDP4 -1.8 -1.7 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.5 -2.5 compare
phage Δdbn_10 -1.5 -2.2 compare
stress Cisplatin 0.1 mg/ml -1.4 -1.8 compare
phage Ste41 -1.4 -2.2 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -1.3 -2.7 compare
carbon source carbon source D-Mannose 1mM -1.3 -1.4 compare
motility outer cut, LB soft agar motility assay -1.2 -2.4 compare
carbon source Glycolic Acid (C) -1.1 -2.9 compare
stress 3-methyl-1-butanol 1.25 vol% -1.1 -2.2 compare
carbon source carbon source D-Mannose 5mM -1.1 -1.0 compare
carbon source Ying_Nucleobase14 rep B; time point 3 -1.0 -3.3 compare
carbon source Guanosine 0.35306 mM (C) -1.0 -3.6 compare
carbon source carbon source D-Glucose 5mM -1.0 -1.3 compare
phage Ste41 -1.0 -1.7 compare
phage N4_phage 0.009375 MOI TC1 -1.0 -2.2 compare