Fitness data for b1396 in Escherichia coli BW25113

paaI: predicted thioesterase (NCBI)
SEED: Phenylacetic acid degradation protein PaaD, thioesterase
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
control PBS_cage_2_mouse_1_Cecum_40 hr -0.9 -1.7 compare
carbon source Ying_Nucleobase14 rep B; time point 3 -0.9 -3.5 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr -0.8 -1.6 compare
carbon source Glycolic Acid (C) -0.8 -2.7 compare
carbon source carbon source D-Mannose 20mM -0.8 -1.9 compare
phage TP9 -0.7 -3.1 compare
no phage control CTR -0.7 -1.4 compare
stress Trimethoprim 0.005 mM -0.6 -1.1 compare
carbon source Ying_Nucleobase14 rep B; time point 2 -0.6 -3.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.6 -1.7 compare
stress nitrite 10 mM +0.6 +1.8 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.6 +1.7 compare
motility inner cut, LB soft agar motility assay +0.7 +1.3 compare
gfp_control GFP_control +0.7 +3.1 compare
stress A22 0.08 mg/ml +0.7 +2.1 compare
stress Cisplatin 0.1 mg/ml +0.8 +1.9 compare
phage T7_phage 0.00015625 MOI TC4 +0.8 +2.2 compare
phage T7_phage 0.00015625 MOI TC3 +0.8 +1.2 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.9 +3.1 compare
stress Benzalkonium Chloride 0.004 mg/ml +1.2 +2.7 compare