Fitness data for b1344 in Escherichia coli BW25113

ydaO: predicted C32 tRNA thiolase (NCBI)
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
stress LB Aerobic with Ramoplanin 0.000125 mM -2.6 -4.4 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -1.7 -2.3 compare
stress M9 Anaerobic Capecitabine 5000 uM -1.6 -3.0 compare
nitrogen source Putrescine (N) -1.6 -3.9 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON -1.4 -1.5 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -1.4 -2.5 compare
stress 2-Furfuraldehyde 0.25 vol% -1.4 -3.7 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.3 -2.5 compare
msc 22hr_MSC_rep1_highinoculum -1.3 -2.5 compare
phage Phage_N4_cage_4_mice _Feces_22 hr -1.2 -2.1 compare
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM -1.2 -2.7 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM -1.2 -2.0 compare
stress LB Anaerobic with Spectinomycin 0.0000625 mM -1.1 -3.7 compare
protonated/deuterated deuterated glucose in H2O -1.0 -1.8 compare
stress 1-ethyl-3-methylimidazolium chloride 40 mM +1.0 +3.0 compare
carbon source L-Malic (C) +1.2 +2.2 compare
carbon source Acetate (C) +1.2 +5.2 compare
carbon source carbon source D-Glucose 0.25mM +1.3 +1.3 compare
motility inner cut, LB soft agar motility assay +1.4 +1.2 compare
stress octanol 0.08 vol% +1.5 +2.6 compare