Fitness data for b1276 in Escherichia coli BW25113

acnA: aconitate hydratase (NCBI)
SEED: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
KEGG: aconitate hydratase 1

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
M9 Acetate 0.5% aerobic -1.2 -7.5 compare
M9 Acetate 0.5% aerobic -1.1 -6.9 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.8 -2.2 compare
carbon source Ying_AminoAcid20 rep A; time point 3 -0.7 -3.5 compare
control PBS_cage_1_mice _Feces_16 hr -0.7 -2.4 compare
carbon source Ying_AminoAcid20 rep C; time point 3 -0.7 -3.3 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.7 -2.3 compare
carbon source carbon source D-Mannose 0.5mM -0.6 -1.6 compare
carbon source Ying_AminoAcid20 rep B; time point 3 -0.6 -3.3 compare
control PBS_cage_1_mice _Feces_40 hr -0.6 -1.9 compare
stress Chlorite 1.25 mM -0.6 -2.3 compare
control PBS_cage_1_mouse_2_Cecum_40 hr -0.6 -1.5 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.6 -2.9 compare
stress Nalidixic 0.06 mM -0.6 -3.3 compare
no stress control BHIS no stress control; Dimethyl Sulfoxide 1 vol% 24 hr -0.5 -4.0 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.5 +1.5 compare
phage Ste41 +0.5 +1.0 compare
phage Δdbn_10 +0.6 +1.8 compare
phage R1_N4_T2_phage8 +0.7 +2.9 compare
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.8 +4.2 compare