Fitness data for b1189 in Escherichia coli BW25113

dadA: D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data)
Original annotation: D-amino acid dehydrogenase small subunit (NCBI)
SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
KEGG: D-amino-acid dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source D-Alanine (N) -3.3 -9.0 compare
nitrogen source D-Alanine (N) -2.0 -8.1 compare
mixed community control; abiotic network mixed community control; abiotic network -1.9 -4.4 compare
nitrogen source L-Alanine (N) -1.2 -5.0 compare
stress Chlorite 1.25 mM -1.0 -3.7 compare
stress Trimethoprim 0.005 mM -0.8 -2.8 compare
nitrogen source L-Alanine (N) -0.8 -4.6 compare
carbon source Ying_Nucleobase14 rep A; time point 3 +0.7 +4.0 compare
carbon source Ying_Nucleobase14 rep B; time point 3 +0.7 +4.6 compare
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.7 +6.1 compare
motility inner cut, LB soft agar motility assay +0.8 +3.4 compare
gfp_control GFP_control +0.8 +3.4 compare
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.8 +5.4 compare
stress D-Cycloserine 0.1 mg/ml +0.8 +7.0 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.8 +3.2 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.9 +1.8 compare
carbon source carbon source D-Glucose 0.25mM +0.9 +3.1 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +1.0 +3.0 compare
phage RB51m1 +1.1 +3.2 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +1.2 +3.0 compare