Fitness data for b1034 in Escherichia coli BW25113

ycdX: hypothetical protein (NCBI)
SEED: Putative hydrolase YcdX (EC 3.1.-.-)
KEGG: putative hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage N4_phage 0.009375 MOI TC2 -1.3 -2.6 compare
carbon source carbon source D-Mannose 0.5mM -1.2 -1.8 compare
phage PoolT9D30 -0.8 -2.3 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.8 -2.0 compare
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.8 -3.0 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.7 -1.7 compare
stress 3-methyl-1-butanol 1.25 vol% -0.7 -1.9 compare
stress RCH2_defined_1percent_glucose with Chloride 200 mM and Betaine 100 uM -0.7 -3.0 compare
no phage control CTR -0.7 -1.8 compare
phage Ste41 -0.6 -1.4 compare
phage Goslar -0.6 -1.9 compare
stress 1-ethyl-3-methylimidazolium chloride 40 mM +0.6 +3.0 compare
no phage control CTR +0.6 +1.8 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.6 +1.9 compare
phage RB51m1 +0.7 +1.2 compare
motility outer cut, LB soft agar motility assay +0.7 +2.2 compare
stress Cisplatin 0.1 mg/ml +0.8 +2.2 compare
stress LB Aerobic with Oxytetracycline 0.0000003125 mM +0.8 +3.7 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +0.8 +1.6 compare
control PBS_cage_1_mice _Feces_16 hr +0.8 +2.3 compare