• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Fitness data for b1023 in Escherichia coli BW25113

    ycdR: predicted enzyme associated with biofilm formation (NCBI)
    SEED: Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
    KEGG: biofilm PGA synthesis lipoprotein PgaB

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


    Add gene:

    Or see all 1268 experiments or choose conditions

    group condition fitness t score  
    M9 Glucose 2%, 20 mM NO3- anaerobic -0.8 -5.0 compare
    M9 Acetate 0.5% aerobic -0.8 -5.3 compare
    M9 Acetate 0.5% aerobic -0.7 -4.8 compare
    M9 Glucose 2% anaerobic -0.7 -4.5 compare
    carbon source carbon source D-Glucose 0.25mM -0.6 -2.5 compare
    M9 Glucose 2% anaerobic -0.6 -4.6 compare
    M9 Glucose 2% aerobic -0.6 -4.2 compare
    stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.6 -3.1 compare
    stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -0.6 -3.2 compare
    M9 Glucose 2% aerobic -0.6 -3.5 compare
    mzaabcde mzaABCDE -0.6 -3.4 compare
    retron_ec_48_control retron_Ec_48_control -0.5 -3.6 compare
    drt_type_3 DRT_type_3 -0.5 -3.6 compare
    stress LB Aerobic with Ramoplanin 0.000125 mM +0.5 +3.3 compare
    attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.6 +2.9 compare
    stress Bacitracin 1 mg/ml +0.6 +4.3 compare
    phage Δdbn_10 +0.6 +3.3 compare
    stress Trimethoprim 0.005 mM +0.8 +3.7 compare
    stress LB Anaerobic with Amoxicillin 0.0000078125 mM +0.8 +3.0 compare
    phage N4_phage 0.009375 MOI TC2 +0.9 +5.7 compare