Fitness data for b1013 in Escherichia coli BW25113

ycdC: predicted DNA-binding transcriptional regulator (NCBI)
SEED: Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
KEGG: TetR/AcrR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source carbon source D-Glucose 0.25mM -2.4 -1.6 compare
no phage control CTR -2.0 -1.8 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -1.7 -1.9 compare
phage Ste41 -1.7 -1.4 compare
stress Chloramphenicol 0.005 mg/ml -1.6 -2.5 compare
carbon source carbon source D-Mannose 1mM -1.4 -2.1 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.4 -1.4 compare
phage Ste41 -1.4 -1.1 compare
carbon source Dodecanol and Rhamnolipid (C) -1.3 -2.0 compare
protonated/deuterated deuterated glucose in H2O -1.3 -1.6 compare
stress LB Anaerobic with Azlocillin 0.000015625 mM -1.3 -2.4 compare
nophagecontrol R1_N4_T1_phage0 -1.2 -1.4 compare
stress 2-nitrobenzenesulfonyl fluoride +1.3 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +1.3 +1.3 compare
carbon source Casamino-acids +1.4 +3.2 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM +1.4 +3.1 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +1.4 +2.1 compare
phage Papa dilution 10-1 cacl2 maltose +1.5 +4.0 compare
phage Δdbn_10 +1.5 +2.2 compare
carbon source Casamino-acids +1.6 +3.2 compare