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  • Fitness data for b1010 in Escherichia coli BW25113

    ycdK: hypothetical protein (NCBI)
    KEGG: UPF0076 protein RutC

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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    group condition fitness t score  
    phage Ste41 -1.6 -3.3 compare
    phage T7_phage 0.00015625 MOI TC3 -1.4 -2.2 compare
    motility outer cut, LB soft agar motility assay -1.2 -1.5 compare
    carbon source carbon source D-Mannose 5mM -0.9 -1.2 compare
    phage NpK -0.9 -2.5 compare
    phage RB68 -0.9 -2.2 compare
    phage Ste41 -0.8 -1.7 compare
    control PBS_cage_1_mice _Feces_40 hr -0.8 -2.0 compare
    plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.8 +1.0 compare
    stress Carbenicillin 0.004 mg/ml +0.9 +3.3 compare
    stress Benzalkonium Chloride 0.004 mg/ml +0.9 +1.7 compare
    carbon source Dodecanol and Rhamnolipid (C) +0.9 +1.7 compare
    control PBS_cage_2_mouse_2_Cecum_40 hr +0.9 +1.4 compare
    control PBS_cage_2_mice _Feces_40 hr +0.9 +2.0 compare
    phage Papa dilution 10-1 cacl2 maltose +1.0 +3.2 compare
    control PBS_cage_2_mouse_1_Cecum_40 hr +1.0 +1.9 compare
    stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +1.1 +5.8 compare
    stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +1.1 +3.8 compare
    motility inner cut, LB soft agar motility assay +1.2 +1.8 compare
    no phage control CTR +1.3 +1.1 compare