Fitness data for b0876 in Escherichia coli BW25113

ybjD: conserved protein with nucleoside triphosphate hydrolase domain (NCBI)
SEED: Predicted ATP-dependent endonuclease of the OLD family, YbjD subgroup
KEGG: putative ATP-dependent endonuclease of the OLD family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage RhdML5 -0.8 -1.7 compare
carbon source acetate (C) -0.7 -2.1 compare
yeast Calbicans -0.6 -2.8 compare
phage TP4 -0.6 -2.2 compare
carbon source D-Glucosamine Hydrochloride (C) -0.6 -2.3 compare
yeast Calbicans -0.5 -2.1 compare
stress Ciprofloxacin Hydrochloride 0.0024 mM -0.5 -1.7 compare
stress LB Anaerobic with Norfloxacin 0.0000000390625 mM -0.5 -2.5 compare
motility outer cut, LB soft agar motility assay -0.5 -1.5 compare
stress 3-methyl-1-butanol 1.25 vol% -0.5 -1.9 compare
control PBS_cage_2_mouse_2_Cecum_40 hr -0.5 -1.5 compare
carbon source carbon source D-Mannose 5mM -0.5 -1.3 compare
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.5 -2.5 compare
stress nitrite 20 mM +0.5 +2.2 compare
lb LB, Anaerobic +0.5 +3.4 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.5 +1.7 compare
phage PoolT9D26 +0.5 +1.8 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.6 +2.1 compare
phage Ste41 +0.7 +2.8 compare
phage T7_phage 0.00015625 MOI TC4 +0.9 +3.1 compare