Fitness data for b0608 in Escherichia coli BW25113

ybdR: predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI)
SEED: Uncharacterized zinc-type alcohol dehydrogenase-like protein ybdR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.5 -2.5 compare
phage HSDP4 -0.5 -1.4 compare
phage T7_phage 0.00015625 MOI TC4 -0.5 -1.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.5 -1.2 compare
control PBS_cage_1_mice _Feces_40 hr -0.5 -1.5 compare
msc 3hr_mediaonly_rep1_lowinoculum -0.4 -2.6 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -0.4 -1.9 compare
lb LB -0.4 -2.6 compare
stress RCH2_defined_1percent_glucose with Chloride 200 mM and Betaine 100 uM -0.4 -2.1 compare
motility outer cut, LB soft agar motility assay +0.4 +0.9 compare
motility outer cut, LB soft agar motility assay +0.4 +2.5 compare
control PBS_cage_2_mouse_3_Cecum_40 hr +0.4 +2.1 compare
control PBS_cage_2_mice _Feces_22 hr +0.4 +1.6 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.4 +1.5 compare
phage PoolT9D23 +0.4 +2.3 compare
phage PoolT9D26 +0.5 +1.0 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON +0.5 +1.8 compare
stress A22 0.08 mg/ml +0.6 +2.9 compare
motility inner cut, LB soft agar motility assay +0.7 +3.3 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.8 +2.4 compare