Fitness data for b0564 in Escherichia coli BW25113

appY: DLP12 prophage; DNA-binding transcriptional activator (NCBI)
KEGG: AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.9)


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group condition fitness t score  
M9 Acetate 0.5% aerobic -4.8 -1.6 compare
motility outer cut, LB soft agar motility assay -3.9 -1.3 compare
motility outer cut, LB soft agar motility assay -3.6 -1.1 compare
carbon source D-Mannose (C) -3.3 -2.3 compare
control PBS_cage_2_mouse_2_Cecum_40 hr -3.2 -0.5 compare
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -3.2 -1.1 compare
msc 6hr_MSC_rep1_highinoculum -3.1 -1.3 compare
M9 Glucose 2% anaerobic -3.1 -4.1 compare
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin -3.1 -1.2 compare
carbon source Cytidine 0.41115 mM (C) -3.1 -1.7 compare
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin -3.0 -1.2 compare
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -3.0 -1.2 compare
msc 22hr_mediaonly_rep1_highinoculum -3.0 -1.1 compare
carbon source Cytidine 0.41115 mM (C) -3.0 -1.4 compare
carbon source Cytidine 0.41115 mM (C) -3.0 -1.6 compare
msc 22hr_MSC_rep1_lowinoculum -3.0 -1.1 compare
nutrient M9 Glucose 0.2%, Thauer's vit mix -3.0 -1.2 compare
carbon source HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 mM (C) -2.9 -1.5 compare
msc 6hr_MSC_rep1_lowinoculum -2.9 -1.3 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +3.0 +1.9 compare