Fitness data for b0556 in Escherichia coli BW25113

rzpD: DLP12 prophage; predicted murein endopeptidase (NCBI)
KEGG: putative Rz endopeptidase from lambdoid prophage DLP12

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
predation 6 hr rep2_HD100_10fold_dilution_grewON -2.1 -1.7 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.4 -1.8 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -1.0 -2.6 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.9 -1.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.9 -0.8 compare
nopredatorcontrol 48 hr NoPredatorControl -0.9 -2.0 compare
carbon source carbon source D-Glucose 20mM -0.9 -1.3 compare
carbon source Ying_sugar7 rep A; time point 2 +0.9 +3.5 compare
carbon source Ying_sugar7 rep A; time point 3 +0.9 +2.0 compare
phage Phage_N4_cage_3_mice _Feces_40 hr +0.9 +2.1 compare
carbon source Ying_Others16 rep C; time point 1 +0.9 +2.2 compare
nophagecontrol R1_N4_T1_phage0 +1.0 +2.6 compare
carbon source Ying_Nucleobase14 rep A; time point 2 +1.0 +1.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +1.1 +2.5 compare
carbon source Ying_Nucleobase14 rep B; time point 2 +1.1 +1.9 compare
carbon source Ying_Nucleobase14 rep C; time point 2 +1.1 +1.9 compare
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr +1.1 +2.9 compare
carbon source Ying_Nucleobase14 rep C; time point 3 +1.6 +1.4 compare
carbon source Ying_Nucleobase14 rep A; time point 3 +1.7 +1.6 compare
carbon source Ying_Nucleobase14 rep B; time point 3 +1.8 +1.7 compare