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  • Fitness data for b0546 in Escherichia coli BW25113

    ybcM: DLP12 prophage; predicted DNA-binding transcriptional regulator (NCBI)
    SEED: Transcriptional regulator, AraC/XylS family

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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    group condition fitness t score  
    motility outer cut, LB soft agar motility assay -1.4 -3.9 compare
    M9 Glucose 2%, 20 mM NO3- anaerobic -1.0 -4.8 compare
    M9 Glucose 2% aerobic -0.9 -4.7 compare
    M9 Acetate 0.5% aerobic -0.9 -3.7 compare
    M9 Glucose 2% anaerobic -0.9 -4.5 compare
    stress Cisplatin 0.1 mg/ml -0.8 -3.4 compare
    stress Benzalkonium Chloride 0.004 mg/ml -0.8 -3.4 compare
    M9 Acetate 0.5% aerobic -0.8 -3.6 compare
    M9 Glucose 2% aerobic -0.8 -3.9 compare
    M9 Glucose 2% anaerobic -0.7 -3.9 compare
    phage Phage_N4_cage_3_mouse_1_Cecum_40 hr -0.7 -3.3 compare
    motility inner cut, LB soft agar motility assay -0.7 -2.8 compare
    plasmid transformation mariner vector transformation; liquid outgrowth assay +0.7 +2.6 compare
    stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.7 +2.9 compare
    stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM +0.7 +2.8 compare
    phage N4_phage 0.009375 MOI TC2 +0.7 +3.3 compare
    stress Ciprofloxacin Hydrochloride 0.0003 mM +0.7 +3.0 compare
    phage HSDP4 +0.8 +2.4 compare
    phage T7_phage 0.0015625 MOI TC2 +0.9 +3.6 compare
    phage Papa dilution 10-1 cacl2 maltose +1.0 +3.8 compare