Fitness data for b0504 in Escherichia coli BW25113

ybbS: DNA-binding transcriptional activator of the allD operon (NCBI)
SEED: DNA-binding transcriptional activator of the allD operon
KEGG: LysR family transcriptional regulator, transcriptional activator of the allD operon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.6 -2.3 compare
no phage control CTR -1.4 -1.7 compare
gfp_control GFP_control -1.0 -1.1 compare
carbon source carbon source D-Glucose 5mM -1.0 -1.4 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -1.0 -1.2 compare
carbon source Dodecanol and Rhamnolipid (C) -0.9 -1.7 compare
ppi ppI -0.9 -1.6 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.9 -2.0 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.9 -3.0 compare
stress octanol 0.08 vol% -0.8 -1.0 compare
stress LB Anaerobic with Levofloxacin 0.0000000625 mM -0.8 -2.6 compare
stress LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM -0.8 -2.5 compare
stress Bacitracin 1 mg/ml -0.8 -1.9 compare
phage HSDP4 +0.9 +1.4 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON +0.9 +1.9 compare
protonated/deuterated deuterated glucose in D2O +0.9 +3.6 compare
phage PoolT9D30 +0.9 +1.6 compare
carbon source carbon source D-Mannose 0.5mM +0.9 +2.4 compare
protonated/deuterated deuterated glucose in D2O +1.0 +3.1 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +1.7 +2.5 compare