Fitness data for b0186 in Escherichia coli BW25113

ldcC: lysine decarboxylase 2, constitutive (NCBI)
SEED: Lysine decarboxylase 2, constitutive (EC 4.1.1.18)
KEGG: lysine decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage T7_phage 0.0015625 MOI TC2 -0.6 -2.6 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.5 -2.7 compare
phage T7_phage 0.0015625 MOI TC1 -0.4 -2.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM -0.4 -2.2 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.4 -2.1 compare
phage Ste41 -0.3 -1.6 compare
phage T7_phage 0.00015625 MOI TC4 -0.3 -1.7 compare
stress 3-methyl-1-butanol 1.25 vol% -0.3 -1.8 compare
nophagecontrol R1_N4_T1_phage0 -0.3 -1.8 compare
phage T7_phage 0.00015625 MOI TC3 -0.3 -1.4 compare
phage PoolT9D19 +0.3 +1.5 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.3 +2.0 compare
phage PoolT9D24 +0.3 +1.4 compare
control PBS_cage_1_mouse_2_Cecum_40 hr +0.3 +1.7 compare
plasmid transformation vcDART vector transformation; agar assay +0.3 +2.4 compare
phage Papa dilution 10-1 cacl2 maltose +0.3 +2.1 compare
stress LB Anaerobic with 8-hydroxy-nitroquinoline 0.00000125 mM +0.3 +2.6 compare
control PBS_cage_1_mice _Feces_16 hr +0.3 +1.4 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.4 +2.4 compare
phage PoolT9D30 +0.4 +1.7 compare