Pairwise Alignments

Query, 495 a.a., Multidrug transporter from Rhodanobacter sp. FW510-T8

Subject, 961 a.a., protease3 from Alteromonas macleodii MIT1002

 Score =  133 bits (335), Expect = 2e-35
 Identities = 115/449 (25%), Positives = 195/449 (43%), Gaps = 11/449 (2%)

Query: 38  PAPGPAPALSVPTPVTQTLANGLQVVSVRRADLPLVTAQLVLRRGGEMDPPPLAGLADLT 97
           P  G AP + VP      LANG++++ V   + P VT  L +  G  +DP   AG A LT
Sbjct: 511 PKAGEAPVVEVPDYWESELANGIEILGVTSTETPTVTLTLGMDGGMLLDPEGKAGTAYLT 570

Query: 98  ANLLTKGAAGRSAPQIAAAAEALGGSLDAAAGWDQSAVGITVTTPKLPQALELLAEVVRR 157
           A L+ +     S  ++A+    LG ++  +     S V ++  T  L + L LL E + +
Sbjct: 571 ALLMNETTKHYSNEELASELAKLGSAIRFSTAGRYSQVYVSTLTKHLDETLALLKEKLFK 630

Query: 158 PDFSAAELKRAQAQAIDDLRLSLSRPTALASLAASRGVFG-DGAYGHSRAGTPASLARIG 216
           P F+  +  R + + +  L+     P++LA  A    +FG D        GT  ++  I 
Sbjct: 631 PAFTQEDFDRMKERVVQGLQQQAKTPSSLARRARDLVLFGEDNRVSLPDEGTLQTVQNIT 690

Query: 217 RADVQRLHAALYRPDNAILILAGDVTPAQAQQLAQASFGDWPKPATPLPARPAGKAASQL 276
             DV+  +A  Y PD A +++ G++ P +         G W K  T   A  +     + 
Sbjct: 691 LEDVKTFYANYYSPDKASIVVVGNL-PKKDMVNTLDFIGQW-KGNTYEFADYSDFPKYEE 748

Query: 277 PAVLLIDQHGAGQAGV-VAAHAAPPRGDGDYYVGTVANAVLGGSYSARLNEEIRIKRGLS 335
             + L+D   A Q+ V +   + P    GD++   + N  LGG++++R+N  +R  +G +
Sbjct: 749 NQIFLVDSPEAVQSVVFIVDRSLPFDATGDHFKSRLMNFPLGGAFNSRINLNLREDKGYT 808

Query: 336 YGAGSRLEPLRDAGLWLASAQTKNPSAAPVVELMLGEFKRLGDTRVSAEELAARKATLIG 395
           YGA S     +  G + AS      +    +  +L E  R     V+ EE+A  +     
Sbjct: 809 YGANSGFVGGKTLGWFEASTDLTAANTGEGIAEILKEINRYRTEGVTEEEIAFMRNAFTL 868

Query: 396 GYGRSLETTAGLAGQVGELAVYGVPLDEIGRYIAKVQAVTPKQVEKYAGRHLAAGAGTVV 455
                 ET    A  + +L  YG+        +A +  +  K ++  A ++L      ++
Sbjct: 869 SDALEFETPTSKARFLRQLLSYGLDKGYREEQLAIINNIDKKTMDTLAKQYLNLDKMQII 928

Query: 456 VVGDAAQFAADIRKAHPQATLLESTTLDL 484
           VVGD A       K  PQ   L    ++L
Sbjct: 929 VVGDKA-------KILPQLNALSMPIIEL 950



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 100/450 (22%), Positives = 177/450 (39%), Gaps = 34/450 (7%)

Query: 55  TLANGLQVVSVRRADLPLVTAQLVLRRGGEMDPPPLAGLADLTANLLTKGAAGRSAPQIA 114
           TL NGL V+       PLV   +    G   +    +G A    +++ +G+   +  Q  
Sbjct: 52  TLENGLTVILHEDHSDPLVHVDVTYHVGSAREEVGKSGFAHFFEHMMFQGSKHVADEQHF 111

Query: 115 AAAEALGGSLDAAAGWDQSAVGITVTTPKLPQALEL-------LAEVVRRPDFSAAE--L 165
                 GG+L+     D++    TV   +L + L L       L E V +  F      +
Sbjct: 112 KVITESGGNLNGTTNTDRTNYFETVPANQLEKVLWLESDRMGYLLEAVDQTKFENQRETV 171

Query: 166 KRAQAQAIDDLRLSLSRPTALASLAASRGVFGDG-AYGHSRAGTPASLARIGRADVQRLH 224
           K  +AQ +D+      +P  L        ++ +G  Y     G    L R+   D++   
Sbjct: 172 KNERAQRVDN------QPYGLRFELNGEALYPEGHPYSWMTIGYVEDLDRVDVNDLKAFF 225

Query: 225 AALYRPDNAILILAGDVTPAQAQQLAQASFGDWPKPATPLPARPAGKAASQLPAVLLIDQ 284
              Y P+NA+L + GD+  A+ +      FG+ P         P      +   V L D+
Sbjct: 226 KRWYGPNNAVLTIGGDIDVAKTKAWVNKYFGEIPSGPKVEEPEPQPVTLDETRYVTLEDK 285

Query: 285 HGAGQAGVVAAHAAPPRGDGDYYVGTVANAVLGGSYSARLNEEIRIKRGLSYGAGSRLEP 344
                  +        R + +  +  +A  +LGG  ++   + + +K G++  A     P
Sbjct: 286 VHLPLLQITYP-TVYGRHEDEAPLDVLAE-ILGGGKTSLFYKNL-VKEGMAVQAVVS-HP 341

Query: 345 LRDAGL---WLASAQTKNPSAAPVVELMLGEFKRLGDTR-VSAEELAARKATLIGGYGRS 400
            R+       LA A     ++   ++ +L E  +  +TR V+A++LA  K  +     R+
Sbjct: 342 CRELACEFQLLALANPAKITSLSTLQNVLNETLKEFETRGVTADDLARTKGQI---EART 398

Query: 401 LETTAGLAGQVGELAV----YGVPLDEIGRYIAKVQAVTPKQVEKYAGRHLAAGAGTV-- 454
           +     ++G+V  LA     Y  P D I   IA+  AVT + V +   +++      V  
Sbjct: 399 VFGLQSVSGKVSALAANETFYQTP-DLIAEDIARYNAVTAEDVMRVYNKYIKDANSVVLS 457

Query: 455 VVVGDAAQFAADIRKAHPQATLLESTTLDL 484
           VV     Q AA  +        +E  T+D+
Sbjct: 458 VVPKGQVQLAAAKQTFERPVRNIEIDTVDV 487