Pairwise Alignments

Query, 322 a.a., IS110 family transposase from Rhodanobacter sp. FW510-T8

Subject, 321 a.a., transposase from Pseudomonas putida KT2440

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 92/332 (27%), Positives = 154/332 (46%), Gaps = 33/332 (9%)

Query: 1   MNSEQVVLGIDVAKAKLDCALSVGSKYRTKVFPNTSPGFARLVAWLLQHEAAHAPVCMEA 60
           M++  +  G+D +K +L   +      ++   PNT      + AWL       A + +EA
Sbjct: 3   MSAIPIEAGVDTSKDEL--VIQAAPNTKSFAIPNTPKA---IKAWLKTLPKGSA-LAIEA 56

Query: 61  TGIYWEAAATYLADAGHRVSVINPALAKAHAQSLGLRSKTDVLDAKMLAHFCREKQP--P 118
           T  Y    A     AG  V VI+      + +S+ +R+KTD  DA +LA F   ++    
Sbjct: 57  TSTYHMEMAEQAHAAGFAVYVIDGLRLSKYRESVAIRAKTDAHDAALLARFLSNERGSLK 116

Query: 119 AWVPPPASERRLRALVLRHQALIEMQTQEKNRSESLREDVRNSVETHLAWLADELKRIEQ 178
           AW PPPA  R ++ L+ R   L+           ++R  +R S+     + A ELKR+E+
Sbjct: 117 AWTPPPAGHREIQVLLRRRAKLV-----------AVRGMLRMSLSGDKLF-ASELKRVEE 164

Query: 179 AIAQL-LDDDDDLRG---------QRDLLASIPGLGERTIAVLLAYGVSSERFDTARQFV 228
            + ++ L  +  LR          Q   +  +PG+G  T A L+   +  E F  +  FV
Sbjct: 165 VLERIELSLEKQLRAVIKKAGLSDQMRRVQRLPGVGFLTAAGLVMSFMRGE-FKNSDAFV 223

Query: 229 AFGGLSPRLHESGSSVRGRPRLSKVGHAFLRRSLYMPAMVTLYRTAWGQRFRQRLADHGK 288
           A+ G+   + +SG    GR +LSK G + +RR LY  +M       W Q +    A  GK
Sbjct: 224 AYLGMDVTVSQSGKWA-GRGKLSKRGDSEVRRLLYNASMSGSRTATWKQYYAHHQA-RGK 281

Query: 289 PPKLIIGAMMRKLAQVAFGVLKSGKPFDPILH 320
                +  + R+LA++AFG+++    + P ++
Sbjct: 282 KTTQALVILARRLARLAFGLMRHQADWKPEIY 313