Pairwise Alignments

Query, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

Subject, 376 a.a., flagellar motor protein MotB from Dickeya dadantii 3937

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 88/353 (24%), Positives = 154/353 (43%), Gaps = 72/353 (20%)

Query: 1   MRRHRHEEHQNHE--AWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGS 58
           +R+ R   H  H   +W I YAD MT ++A F+VM+ +++ +  +   ++E         
Sbjct: 8   IRKKRKSGHAAHHGGSWKIAYADFMTAMMALFLVMWLIAISSPSQLAQIAEYF------- 60

Query: 59  SHAIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREAAHRSRP 118
                   P +I       AI +    S +S          +P+P  G    +     + 
Sbjct: 61  ------RTPLKI-------AITSGPKMSDAS----------NPIPGGGSDPTQQEGDVKR 97

Query: 119 QEEL--GRIED----QVRKALQPLID--------RKLVVVRHKPDWLEVEI---RTDILF 161
           Q +   GR+E+    ++R+ L  LI+        R  +++    + L ++I       +F
Sbjct: 98  QIDTMDGRLEEIKLNKLRERLDQLIEADPRLKALRPHLLIEMVDEGLRIQIIDSNNRPMF 157

Query: 162 PSGVAQLSDPANAVLRDLAAILARFANQLRVEGFTDDV--PINTSLYPSNWELSAARAAS 219
            +G AQ+    + +LR +A IL    N++ + G TDD    +    Y SNWELSA RA +
Sbjct: 158 KTGSAQVEPYMSDILRAIAPILNDIPNKISLSGHTDDAQYAMGERGY-SNWELSADRANA 216

Query: 220 VARLFATNGIAPDR-LGIIGWGEVRPIADNATAEGRNQ--NRRVLVVVMGNGQA-----A 271
             R     G+A  + L ++G  +   +     A+G +   NRR+ +VV+ N QA      
Sbjct: 217 SRRELIIGGLAEGKVLRVVGMADTMNLKQ---AKGGSDAINRRISLVVL-NKQAQENIER 272

Query: 272 QRGQSDAGHVDQVSGLVPAPVPDVLPTVRVFGSPEAPPAREGDRSAAPTAEVS 324
           +  +S A ++D++  L    +  V         P   PA  G+ +AAP  E +
Sbjct: 273 ENAESSAVNIDKIENLQNMGMDKV--------KPATAPADNGNSTAAPQPETN 317