Pairwise Alignments

Query, 423 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 567 a.a., Copper/silver efflux RND transporter, membrane fusion protein CusB from Variovorax sp. SCN45

 Score =  294 bits (752), Expect = 5e-84
 Identities = 177/405 (43%), Positives = 232/405 (57%), Gaps = 13/405 (3%)

Query: 26  RHVGATSTPASASAGAQRKVLYWYDTMVPEQHFDHPGVSP-MGMPMVPKYADDSSIDKNV 84
           RH+ A            +K+LY++D MVP   FD P  SP M M M P YA     D+N 
Sbjct: 72  RHIAAGLKAGDTDPNNGKKILYYHDPMVPGNRFDKPAKSPFMDMMMSPVYAGGDG-DQNS 130

Query: 85  VHIDPATVQNLGVRTAPVVRRVLANQLQVPGTVSWNLRDAVTVSARVDATVEQLDVRAPY 144
           V +     QNLGVRTA V    ++ Q+   G++++N RD V V AR    VE+L+VRA  
Sbjct: 131 VTVSARVQQNLGVRTAVVSEGTVSPQVTTVGSIAFNERDQVIVQARATGYVERLNVRATL 190

Query: 145 TTVKAGQPLVELLAPQWSSAISEYRALQHAHSADAQALRAAARQRLQVLGLTAQDIAS-E 203
             VK GQPL EL  P+W +A  E+ ++Q     D  +L   ARQR++ +G+    I    
Sbjct: 191 DQVKKGQPLAELYVPEWIAAQEEFLSVQRMRGTDLASLIDGARQRMRQVGMNDGQIELVA 250

Query: 204 RGGH----ITLHAPKGGVVTTLDVREGQQVGAGQTLMTLNGLSTVWVEAALPQAAAGTVR 259
           R G     ITL AP GGVVT L  REG  V AG TL  +NGL++VW  A +P++ +  VR
Sbjct: 251 RSGRTQPRITLVAPIGGVVTELAAREGMTVSAGTTLFRINGLASVWANAEVPESQSALVR 310

Query: 260 TGTPVTVRATALPGQVFRGQVEALLPDLDPMTRTQRARIVLPNPDHALSPGQFVTVELQP 319
            G  V  R  A PG+ F G+V+A+LPD++P TRT +AR+ L NP   L PG FV+++   
Sbjct: 311 LGARVQARTPAAPGETFEGKVQAILPDVNPATRTLKARLELANPTGRLVPGMFVSMQFTD 370

Query: 320 PPARPELVVPDGAVIATGSDTPRVIVAEGNGQFRPVAVRLGRSAGGDTEILAGLSSDERV 379
             A   L++P  AVI TG     V++AE NG+FRPV V +G   GG TEI  GL + +RV
Sbjct: 371 MRADKTLLIPTEAVIQTGKRAV-VMLAEDNGRFRPVDVEIGLETGGQTEIKRGLQAGQRV 429

Query: 380 VVSGQFLIDSEASLSGALQRLQ-----SSEPAHTASSAMPGMPMP 419
           VVS QFLIDSEASL G   RL      ++  A TA+SA P    P
Sbjct: 430 VVSSQFLIDSEASLKGVEARLNAAPGTAAPTAATAASATPAAGAP 474