Pairwise Alignments

Query, 830 a.a., GGDEF and EAL domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  352 bits (902), Expect = e-101
 Identities = 256/751 (34%), Positives = 379/751 (50%), Gaps = 32/751 (4%)

Query: 89   SYEGELHDGSRRRYAHGNFQPDFDAGGRVCGIFTALVDITERHDLELKLHESEQRFFGAF 148
            +Y  +L +G+ R Y     +   D  G    +   L+DIT++ + E +L  SE++F   F
Sbjct: 360  TYRVQLENGTSR-YIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLF 418

Query: 149  QHAAIGMALVAPDS-RWLRVNAALCAMLGYREDEFLSRKTRDITHPDDVATSDMRHAQML 207
            Q +   + +   D+ +++ +N A     G+   + L R   +I    +      R  Q++
Sbjct: 419  QVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVI 478

Query: 208  EGELESCHLEKRYFHRNGSLVHAQLSVSLVRDDDGSPRYFVVQIQDISQRKAFEDALHRE 267
              +  S ++     HRNG  +   +S  L+  DD      V  ++DI+Q++  E AL   
Sbjct: 479  REQALS-NVAVVLNHRNGDPLTCVISSRLITVDDQPCS--VTTLRDITQQQRAEAALKSS 535

Query: 268  RELAEVTLRSIGDAVITTDPQLC-ITSLNPIAEAMTGWSGLEAQGRPIEEIFQLFDARSG 326
             E       S  DA+  T+        +N     +TG+S  E  G  + EI    D +  
Sbjct: 536  EEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQR 595

Query: 327  HAVANPLR--AAISHNTIVDLAGRTLLRHRHGFDTPVEDSSAPIHDNAGNVIGGVLVFHD 384
             A+   LR    + H  ++        R++ G    VE S  PI  N  + +  +L   D
Sbjct: 596  SALLAELRERGRVHHREMLG-------RNKRGDILTVEVSVEPITLNEVDCL--LLTARD 646

Query: 385  VSETRALALKMIHLTQHDTLTGLPNRSQLHEHIGQAIATANRRQQRAALLYADIDNFKQV 444
            VS+ +    ++ HL  HD LT LPNR+ L + + Q IA   R   R ALL+ D+D+FK +
Sbjct: 647  VSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHI 706

Query: 445  NELHGHAAGDRVLRAFAAQLQRCLSGDDLLSRYGGDEFVVVLPHLES--------VGDAA 496
            N+  GH  GD VL+   A+L+  +  +D ++R GGDEFVV+L  LE         V + A
Sbjct: 707  NDSLGHPVGDTVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELA 766

Query: 497  SLGQRLINHGEQTRVDGLAELGLRLSIGISVYPDDAIEPDGLLQHAETALVAVKAQGRHG 556
               + L+   E   +DG   L +  SIG+++ PD    P  LL+ A+ AL   K  GR+ 
Sbjct: 767  DTLRELL--AEPMSLDG-QRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNT 823

Query: 557  YRFFTASMNERTQARRRIETALRQALPRHELELYYQPKVDVHSGRIVGAEALLRWQANGR 616
             + F  +M +    R R+E  LR AL R EL L++QP+VD    RIVGAE LLRW     
Sbjct: 824  TQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQL 883

Query: 617  ELYQPDQFVPVAEDSGLILPIGAWALRRACRQARAWQDLGHAIA----VSVNVSPLQFQH 672
                P QF+ V E+SGLIL +G+W L  AC         G   A    + VN+SP QF+ 
Sbjct: 884  GQQPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQ 943

Query: 673  PEFYHWLDEVLVESGLAPGLLELELTERMVMSGGDATTGLLQRIKRRGVRLSLDDFGTGY 732
             +F   +   L +  L   +L LE+TE +V+   + T   +  +KR GV  ++DDFGTGY
Sbjct: 944  NDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGY 1003

Query: 733  CSLSYLKHFPIDTLKIDRVFVRDLASDRDTATITSAIIAMARSLNKEVVAEGVETHAQVA 792
             SL+YLK  P+D LKID+ FVRD   D + A I  AI+AMARSL+  V+AEGVE   Q+A
Sbjct: 1004 SSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLA 1063

Query: 793  FLRQAGCSQLQGFLFGAALPAAEFQALLTGA 823
            FL + GC   QG+L    LP  EF+ +L  A
Sbjct: 1064 FLERLGCHLYQGYLHSRPLPLPEFRQMLLEA 1094



 Score = 45.4 bits (106), Expect = 2e-08
 Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 120 IFTALVDITERHDLELKLHESEQRFFGAFQHAAIGMALVAPDSRWLRVNAALCAMLGYRE 179
           + +  VD TER   E  L +S++R   A   A +G       S  L  +A    + G   
Sbjct: 261 LISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPP 320

Query: 180 DEFLSRKTRDITHPDDVATSDMRHA--QMLEGELESCHLEKRYFHRNGSLVHAQLSVSLV 237
             F            +   + MR A   + EG   +  +  R    NG+  + +    L 
Sbjct: 321 IPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLY 380

Query: 238 RDDDGSPRYFVVQIQDISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQLCIT----- 292
           RDD G P      + DI+      D + RE+ L+    +      ++ DP +C+T     
Sbjct: 381 RDDQGIPLRMAGTLLDIT------DQVEREQRLSASEEKFASLFQVSPDP-ICVTRQDTG 433

Query: 293 ---SLNPIAEAMTGWSGLEAQGRPIEEI 317
               +NP      GWS  +  GR  EEI
Sbjct: 434 QFIEINPAFTQTFGWSSAQVLGRTAEEI 461



 Score = 37.7 bits (86), Expect = 4e-06
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 2/148 (1%)

Query: 189 DITHPDDVATSDMRHAQMLEGELESCHLEKRYFHRNGSLVHAQLSVSLVRDDDGSPRYFV 248
           D+   +D A +      ++ GE     +  R    +GSL   +++ SL  D  G P+   
Sbjct: 79  DLLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQMIG 138

Query: 249 VQIQDISQRKAFEDAL-HRERELAEVTLRSIGDAVITTDPQLCITSLNPIAEAMTGWSGL 307
           V I++I++++  E AL + E+  A +   S    ++T      I  +N   E M GW G 
Sbjct: 139 V-IREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGS 197

Query: 308 EAQGRPIEEIFQLFDARSGHAVANPLRA 335
           +  G+   E+    +    H +    RA
Sbjct: 198 QVIGKTSLELGLWVNPEQRHQIVESTRA 225