Pairwise Alignments

Query, 207 a.a., polysaccharide export protein from Rhodanobacter sp000427505 FW510-R12

Subject, 379 a.a., lipoprotein required for capsular polysaccharide translocation through the outer membrane (NCBI) from Escherichia coli BW25113

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 23/178 (12%)

Query: 42  RYIIGPGDTLEIFVRDNPSLSTTVP-----------VRPDGRISIPLVQSIMAAGETPDK 90
           +Y +GPGD L + V D+P L+T              V+PDG +  P +  +   G+T  +
Sbjct: 84  QYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAE 143

Query: 91  LASDLEGALGRYVRSPLVTVIVKSFVG--AY-SQQVRVVGQAMMPKAVPYRSGMTLLDVM 147
           + SD+ G L  Y+  P V V + +F    AY S QV   GQ  +   VP    +T+LD +
Sbjct: 144 IRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITN-VP----LTILDAI 198

Query: 148 IEVGGLTKFAAGNGAKVARRLPDGSEQTIPVRLGDLMNGTIKYNMVMQPGDILIIPQS 205
              GGLT  A      +     +G E+ I ++   + NG +  N ++ PGDIL +P++
Sbjct: 199 NAAGGLTDTADWRNVVLTH---NGREERISLQ-ALMQNGDLNQNRLLYPGDILYVPRN 252