Pairwise Alignments

Query, 204 a.a., RNA polymerase sigma factor RpoE from Rhodanobacter sp000427505 FW510-R12

Subject, 176 a.a., Sigma-W factor from Alteromonas macleodii MIT1002

 Score = 75.5 bits (184), Expect = 5e-19
 Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 10/175 (5%)

Query: 11  NELDRALVERVQQGDRRAFDLLVRKYQHKVIGLVSRYVRTHAECEDIAQESFIRAWRAIG 70
           N+ D  LVE+  +G+++A+  L+ +Y+  +     R      +  D+ QE FI  +R++ 
Sbjct: 3   NKRDEKLVEQALRGNKKAWFTLISRYETAMYQYGIRMTGNSHDAADLMQEIFISVFRSLA 62

Query: 71  SFRGDSAFYTWLYKIAVNTAKNHLVAMGRRPPSGDIDADEAEFMAGAERMHDSATPEREL 130
            F+G+ +F +WLY+IA       +    +R P  DID  +A  + GA        PE +L
Sbjct: 63  CFKGEGSFKSWLYRIAHCRC---VELYRKRKPHSDIDDIQAP-LCGA------PCPEMQL 112

Query: 131 MRQEIEQSVFSTVQSLPEELRTAITLREVDGLSYDEIAEAMGCPIGTVRSRIFRA 185
                 +++   +Q+LP   +  + L+     +++EIA+ M   + T +SR++ A
Sbjct: 113 YSDRESRALTQAMQTLPLCQKAVVELKFFGHFTFEEIAQQMDISVNTAKSRLYAA 167