Pairwise Alignments

Query, 985 a.a., Tn3 family transposase from Rhodanobacter sp000427505 FW510-R12

Subject, 1004 a.a., putative transposase from Pseudomonas putida KT2440

 Score =  968 bits (2502), Expect = 0.0
 Identities = 478/987 (48%), Positives = 676/987 (68%), Gaps = 4/987 (0%)

Query: 1   MASIERTAYPRFKRHPSADELEQVYTPTDDELSLAIKQVREPTRRLSFLLLLKGFQRLGY 60
           MAS+ERTAYP       A EL + Y+ +D E+       + P   +   + LK FQ+L Y
Sbjct: 4   MASVERTAYPILPSQLPAKELHRSYSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQLHY 63

Query: 61  FPVVDDVPLAIMRCVRDALRLSGHARPATLESRTLYRYHAAIRRRLGVTA-YRDRGMHVA 119
           F   +++P  ++  VR  LR      P     RTLYR+ AA+R+ L VT  Y   G+ V 
Sbjct: 64  FVPFEELPQELISHVRQCLRYGARIAPRYSNPRTLYRHQAAVRQYLQVTPFYSSDGLAVT 123

Query: 120 ARAMGAAAQVMDHPADLINASIEQLVKDKIELPAFSTLDRMARRIRALVNQRLFNLVQQR 179
            +     A V++   DLINA +++L++   ELPA+STL+ +A    A   +  FNLV  R
Sbjct: 124 EQIARDCAVVLEQRVDLINAMLDELIQRGYELPAYSTLNNLAETALASAQEVTFNLVVTR 183

Query: 180 LSPSDISQLDALLDVESGRRQSPLQLIKQLPKRSSLQHFQRLIEHIARLSNLVGEAHLLV 239
                I +L  LLD + GRRQS    +KQ PK+ S +H + LI+H+A L +      +  
Sbjct: 184 APIEVIYKLKELLDTDFGRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLEAIFE 243

Query: 240 GVPETKIKHFAAEAKALDAAELRDFGAPKRHLLLLSLIHRARIQARDDLAGMYIKRMNNL 299
           G+ + KI+HFAA+A A D +EL+D   PKRH L+L+LI+R R++ RD LA M+I+R++ +
Sbjct: 244 GIVDAKIRHFAAQAAAADVSELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIRRISTI 303

Query: 300 HRRGKEELERLRVRHREKTEAIVATLTDVIQVLDTHPSDTEAGREIRQLLSKRGGIEVLQ 359
           H+R KEELE+++ R R+K E + ATL  V+Q+L   P D EAG  IR+ LS  G ++ L+
Sbjct: 304 HKRAKEELEQIQARQRQKLEQLAATLDGVVQILVQEPDDQEAGSLIREYLSPDGNLDRLR 363

Query: 360 EDCAAINAYSGDNYYPLLWKFFKSHRPTIYRMVRLLDLSTTSEDRSLVEALALVLEHEPR 419
           E CA + A  G+NY PL+WK F+SHR  ++R+  LL L  T++DRSL +AL L+ + E  
Sbjct: 364 ETCAEVQATGGNNYLPLIWKHFRSHRSLLFRLSHLLQLEPTTQDRSLTQALQLIQDSENL 423

Query: 420 RGDWIDEPVDLAFANDRWRRVVSHRAEDGTVRIHRRHLEVCVFSCLANELKTGDMAIGGS 479
             +WIDE VDL+FA++RW +VV   + +G    +RR+LEVCVFS LA+EL++GDM + GS
Sbjct: 424 HREWIDEHVDLSFASERWVKVVRRPSSEGPPT-NRRYLEVCVFSYLASELRSGDMCVQGS 482

Query: 480 EEYADYRGQLLSWDDCESRLADYCGQLGLPTDAAAFVAQLREELTRTAEEIDAAYPD-NN 538
             +ADYR QLL W++C  RL  YC ++GLP  A  FVA L+ +L  TA+++D  +P    
Sbjct: 483 VSFADYRKQLLPWEECLQRLPAYCEKMGLPGTAKEFVASLKTQLEETAQQLDEKFPSCRG 542

Query: 539 QIVIDDRGVPVLKRVVAKEPTESAKALETAILQRMPERNILDILCNVAHWVNFPRHFGPL 598
            + I++ G PVL+RV A++   SA +L+TA++QRMP R++LDI+ N+ HW+ F RHFGP+
Sbjct: 543 DVSINEAGEPVLRRVAARDIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHFGPM 602

Query: 599 SGSDPKLERATERYVLTTFTYGSNLGPVQAARHFRGAVTPHMLSFVNRRHVNGKKLDLAI 658
           SG++PKL+   ERY++T F  G NLGP QAARH  G VTPHMLS+ NRRH++ +KLD A 
Sbjct: 603 SGNEPKLKEPAERYLMTIFAMGCNLGPSQAARHLTGNVTPHMLSYTNRRHLSLEKLDKAN 662

Query: 659 KDIVNAYNTLHLPKVWGDGKSAAADGTKYDMRDQNLMAEYHIRYGGYGGIAYHHVSDTYV 718
           +++V  Y  L LPK+WGDGK+ AADGT++D  D NL+A YH RY   G +AY HV++ Y+
Sbjct: 663 RELVELYLQLDLPKLWGDGKAVAADGTQFDFYDDNLLAGYHFRYRKMGAVAYRHVANNYI 722

Query: 719 ALFSHFIPSGVWEAIYIIEGLLKNKSDIQPDTVHADTQGQSAPVFALSYLLGIKLMPRIR 778
           A+F HFIP G+WEAIY+IEGLLK    ++ DTV++DTQGQSA VFA ++LLGI LMPRIR
Sbjct: 723 AVFQHFIPPGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATVFAFTHLLGINLMPRIR 782

Query: 779 NWQDLKFFRPSAETRYEHIDSLFKDTIDWALIETHWKDLMRVVLSITAGKISSVTLLRKL 838
           NW+DL   RP     Y+HI+ LF DT DW LIETHW+DLM+V LSI AGKISS  LLRKL
Sbjct: 783 NWRDLVMCRPDRGASYKHINRLFTDTADWNLIETHWQDLMQVALSIQAGKISSPMLLRKL 842

Query: 839 GNNSRKNRLYQAFRELGRVVRTNFLLRYISDLDLREKITASTNKVEAYNGFAKWNFFGGE 898
           G+ SR+N+LY A + LG V+RT FLL +I   +LR+++TA+TNK+E+YNGF+KW  FGG+
Sbjct: 843 GSYSRRNKLYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNKIESYNGFSKWLSFGGD 902

Query: 899 GVIADNDPEEQEKTVKYNDLVTNAIIFSNAVDLTRILRELATEGWKPKREDVATMSPYMT 958
            VIA+NDP+EQ+K ++YND+V +++I  N VD+ RIL +LA EGW+   EDV+ +SPY+T
Sbjct: 903 -VIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRILHKLAREGWQFTDEDVSFLSPYLT 961

Query: 959 GHIKRFGDYLIDIDAVPDPFLVELMLE 985
            ++KRFG++ + ++  P+P++ + + +
Sbjct: 962 SNVKRFGEFNLKLNRPPEPWIKDSVFQ 988