Pairwise Alignments

Query, 985 a.a., Tn3 family transposase from Rhodanobacter sp000427505 FW510-R12

Subject, 977 a.a., Transposase, TnpA family from Alteromonas macleodii MIT1002

 Score =  261 bits (666), Expect = 2e-73
 Identities = 226/888 (25%), Positives = 406/888 (45%), Gaps = 27/888 (3%)

Query: 94  TLYRYHAAIRRRLGVTAYRDRGMHVAARAMGAAAQVMDHPADLINASIEQLVKDKIELPA 153
           T+  +   I + LG   + D+      R +   AQ    P +L + +   L+  +I LP 
Sbjct: 101 TVLEHRNNILKYLGFHRFDDKVEADLDRWIEEHAQQGLLPDELFHRAERHLLLKRIVLPG 160

Query: 154 FSTLDRMARRIRALVNQRLFNLVQQRLSPSDISQLDALLDVESGRRQSPLQLIKQLPKRS 213
            +T++R   RI   V+ +LF  V  ++SP     +D LL    G +++    +K+ P  +
Sbjct: 161 PTTIERQIIRICNQVHAQLFEQVFDQMSPELRDAIDDLLQATDGNQRTYFNQLKEYPPGA 220

Query: 214 SLQHFQRLIEHIARLSNLV--GEAHLLVGVPETKIKHFAAE-AKALDAAELRDFGAPKRH 270
            +   +R +E   R  NLV  G       V +T   ++     K   A +++ F   KR+
Sbjct: 221 KISSLKRYLE---RYDNLVSTGINEFEEKVIDTAFLNYLYRLTKRYSAKDMKRFKDHKRY 277

Query: 271 LLLLSLIHRARIQARDDLAGMYIKRMNNLHRRGKEELERLRVRHREKTEAIVATLTDVIQ 330
            L++  +  +R    D L  M+ + M  L R+ K   ++     R++ +  +  + +   
Sbjct: 278 ALMICFLLESRKILLDHLVKMHDQYMTELCRQTKNSHDKKHKEFRKRQKKAIDAVLETTH 337

Query: 331 VLDTHPSDTEA-GREIRQLLSKRGGIEVLQEDCAAINAYSGDNYYPLLWKFFKSHRPTIY 389
           VL   P +     +++ Q + ++  +  + +D           Y  LL   + S R    
Sbjct: 338 VLLEWPDEQPLYKKDLWQRIDEKHLLASI-DDLHIFKRLEERGYCDLLLARYPSLRKYFA 396

Query: 390 RMVRLLDLSTTSEDRSLVEALALVLEHEPRRGDWIDEPVDLAFANDRWRRVVSHRAEDGT 449
             +RL           L++A+  V + +      + E    AF     RR +  +A +  
Sbjct: 397 DFIRL-PFEVAKGSGPLIKAIEFVRKLDDGDLKKLPENTPTAFIPRELRRTLKDQAGN-- 453

Query: 450 VRIHRRHLEVCVFSCLANELKTGDMAIGGSEEYADYRGQLL---SWDDCESRLADYCG-Q 505
             I+R   E+ +   + + L++GD+ +  S+++  +    L   SWD  E+R A Y   Q
Sbjct: 454 --INRNVWEMGLALAMKDALRSGDLYLPQSKQHVSFWDLTLNEPSWD--ETRQAVYTELQ 509

Query: 506 LGLPTDAAAFVAQLREELTRTAEEIDAAYPDNNQIVIDDRGVPVLKRVVAKEPTESAKAL 565
              P +  A ++    E    A+++     DN   +    G   LKR    E  +    L
Sbjct: 510 QPPPHEVRAAISTQFHESVSEAKKLFGL--DNFAEI--QNGRLKLKRDDKLEVPDKVNQL 565

Query: 566 ETAILQRMPERNILDILCNVAHWVNFPRHFGPLSGSDPKLERATERYVLTTFTYGSNLGP 625
           +  I   MP   I  +L  V    ++ RHF P+     + +   +  +    +  +NLG 
Sbjct: 566 QKVIDAHMPSIRIEQLLMEVDQMTHYSRHFVPIQHHQSRPKAFYKSLMAAIISQATNLGV 625

Query: 626 VQAARHFRGAVTPHMLSFVNRRHVNGKKLDLAIKDIVNAYNTLHLPKVWGDGKSAAADGT 685
           V  +   +G VT  ML  + + ++  + L  A  +IVN ++ L L  V G G  +++D  
Sbjct: 626 VSMSNSVKG-VTVDMLRHILQYYIREETLINASAEIVNQHHELPLSAVHGTGTLSSSDAQ 684

Query: 686 KYDMRDQNLMAEYHIRYGGYGGIA---YHHVSDTYVALFSHFIPSGVWEAIYIIEGLLKN 742
           ++ +R  +L+A Y+ RY GY   A   Y HVSD Y    +  I     EA+Y+++GLL+N
Sbjct: 685 RFKIRADSLLASYYPRYYGYYEKAIGIYTHVSDQYSVFSTKIISCSPREALYVLDGLLEN 744

Query: 743 KSDIQPDTVHADTQGQSAPVFALSYLLGIKLMPRIRNWQDLKFFRPSAETRYEHIDSLFK 802
            + ++      DT G +  VFAL +LLG   MPRIR+ +D + +R      Y  ++ L  
Sbjct: 745 NTILKIREHTTDTHGYTEIVFALCHLLGFYFMPRIRDLKDQQLYRIDKTVDYGDLNHLLT 804

Query: 803 DTIDWALIETHWKDLMRVVLSITAGKISSVTLLRKLGNNSRKNRLYQAFRELGRVVRTNF 862
            T D A+IE  W+ +MRV +S+      +  ++++L N+S  +RL +AF  LGR+++T +
Sbjct: 805 KTADLAIIEEQWEYMMRVAISLKQKTAPAHVIVQRLTNSSPSDRLTKAFTNLGRIIKTEY 864

Query: 863 LLRYISDLDLREKITASTNKVEAYNGFAKWNFFGGEGVIADNDPEEQEKTVKYNDLVTNA 922
           +LRY++D +LR+ +    NK E  +   +W FF  +G     D EE          V+NA
Sbjct: 865 ILRYLTDKELRQTVQRQLNKGEYRHKLPRWIFFADQGEFTTGDYEEIMNKASSLSFVSNA 924

Query: 923 IIFSNAVDLTRILRELATEGWKPKREDVATMSPYMTGHIKRFGDYLID 970
           I++ N + ++ I+  L  +G +   E ++ +S     H+   G Y I+
Sbjct: 925 ILYWNTIKISDIVELLRQQGEEIDDETLSHISLLPYKHVLPNGTYFIE 972