Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 574 a.a., single-stranded-DNA-specific exonuclease RecJ from Variovorax sp. OAS795

 Score =  462 bits (1190), Expect = e-134
 Identities = 269/588 (45%), Positives = 351/588 (59%), Gaps = 45/588 (7%)

Query: 22  VHPVLQRIYAARGVLEPGQAEHRLARMLSPQLLGGMAQAVELLVEAIRDDWAILIAGDYD 81
           VHP+L R++AARGVL   + +  LAR+L P  L G  +A  LL +A+     + I  DYD
Sbjct: 21  VHPLLARLFAARGVLAKDELDDGLARLLPPDTLHGTREAAVLLADAMAQHKRLCIVADYD 80

Query: 82  CDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVASLQPT-PQLIVTVDNGVA 140
           CDGAT  AVAVRGLRLLGAR V Y +P+R   GYGL+P     +  +   +++TVDNG+A
Sbjct: 81  CDGATACAVAVRGLRLLGARNVSYLVPDRVVDGYGLTPPIAERVADSGADMLITVDNGIA 140

Query: 141 SVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFDSRVQDARMK 200
           SV GVAAA+ARG++V+VTDHHLPG +LPA D LVNPN     CG     F+S       K
Sbjct: 141 SVEGVAAAKARGLQVLVTDHHLPGPELPAADVLVNPN--QPGCG-----FES-------K 186

Query: 201 NLAGVGVMFYLLLALRAKLHGQGAFG-AAKPDLSPLLDLVALGTVADLVPLDFNNRVLVE 259
           ++AGVGVMFY+LLALR++L  +G F  A++P L  LL LVALGTVAD+V LD NNR LV 
Sbjct: 187 SIAGVGVMFYVLLALRSELRARGTFTPASQPKLDVLLPLVALGTVADVVKLDANNRRLVA 246

Query: 260 AGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMRLGVACLLT 319
            GL+R+R+G   AGIAAL +   R+ A   + D  F +GPR+NAAGRL DM LG+ CLLT
Sbjct: 247 QGLRRIRAGALPAGIAALFKAAGRNAAVATTFDFGFALGPRINAAGRLADMTLGIECLLT 306

Query: 320 DDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASL-------GHTDAVGVALFEPSW 372
           DDA +A   A  LD INRERRD++  M  +A L+A SL       G      +++F+  +
Sbjct: 307 DDAGRADELARMLDGINRERRDIEGGMRDQALLLAESLFGPTAEGGEAPPAAISVFDADF 366

Query: 373 HAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSIP 432
           H GVVG+VAS++K+R HRP   FA +G                       +L+GS RSIP
Sbjct: 367 HEGVVGIVASRIKDRFHRPAFVFAASGAPGKAH-----------------ELKGSGRSIP 409

Query: 433 GFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAIARELIEPERLQA 492
           GFH+RDAL  +  R PG++ RFGGHAMAAG ++  D +  F  A   +A E ++   L  
Sbjct: 410 GFHLRDALDLVAKRHPGVLLRFGGHAMAAGCTVARDKFEVFEQALAEVAHEWLDAATLTR 469

Query: 493 VLYTDGELPPGAATLALARQLREAGPWGQAFPEPLFDNLFDCAGWKLMGERHLRLQLRDP 552
            L TDG L      + L   L     WGQ F  P F    +    +L+GE+HL L+LR  
Sbjct: 470 RLDTDGPLAREYMRIDLVDTLHRE-VWGQGFAPPTFSEEVEVVSQRLVGEKHLALKLR-- 526

Query: 553 RDGAVHDAVMFNAYHGQPPPPRLRAAYELTINDWQGRESPRLLLRHIE 600
             G   D + F   H  P P R+  A+ L  ++WQG    R L+   E
Sbjct: 527 HQGQPVDGIWFG--HTDPLPARVTLAFRLDADEWQGVRRVRFLVEGAE 572