Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 568 a.a., single-stranded-DNA-specific exonuclease RecJ from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  206 bits (524), Expect = 2e-57
 Identities = 159/540 (29%), Positives = 257/540 (47%), Gaps = 63/540 (11%)

Query: 22  VHPVLQRIYAARGVLEPGQAEH----RLARMLSPQLLGGMAQAVELLVEAIRDDWAILIA 77
           +   L  I   RG+    +A+H     L  +  P L+  M QAV  L  A+  +  IL+ 
Sbjct: 25  ISSTLASILCQRGICTFDEAKHFFRPSLQDLHDPFLMKDMDQAVNRLNNALHSNEKILVY 84

Query: 78  GDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVA-SLQPTPQLIVTVD 136
           GDYD DG T  A+    LR   +  +D+ IP+R+  GYG+S   +  + +    LI+++D
Sbjct: 85  GDYDVDGTTSVALMYGFLRNYTSN-IDFYIPDRYKEGYGVSSQGIDWAAENGFTLIISLD 143

Query: 137 NGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFDSRVQ- 195
            G+ S   VA A  +GI  I+ DHHLP E +P   A+++P                RV  
Sbjct: 144 CGIKSADKVAYASEKGIDFIICDHHLPDEDIPQAVAVLDP---------------KRVDC 188

Query: 196 DARMKNLAGVGVMFYLLLA--LRAKLHGQGAFGAAKPDLSPLLDLVALGTVADLVPLDFN 253
               K L+G GV F LL A  ++  +  + A+         LLDL+ +   AD+VP+   
Sbjct: 189 PYPYKELSGCGVGFKLLQAFCIQNNIEQEEAY--------KLLDLLVVSIAADIVPITGE 240

Query: 254 NRVLVEAGLQRMRSGRAC-AGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMRL 312
           NR+L   GLQ +   +    G+ AL E+     + +  T + F   PR+NAAGR+ D + 
Sbjct: 241 NRILAYFGLQHLNGPQPMRPGLDALKELAD-IRSEMDITSIVFGFAPRINAAGRMGDAKN 299

Query: 313 GVACLLTDDAAQARRHAEQLDAINRERRDLQASMVAEA-ELMAASLGHTDAVGVALFEPS 371
            V  LL     +A + A+ ++  N+ERR    ++  EA +++        A    LF+ +
Sbjct: 300 SVRMLLAQTKEEAFKMADIINESNKERRSKDTNITKEALQMIEQDEFLRTANSTVLFKET 359

Query: 372 WHAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSI 431
           WH GV+G+VAS+  E  +RP I    +                      N +  GSARS+
Sbjct: 360 WHKGVIGIVASRCIEHYYRPTIILTQS----------------------NGKASGSARSV 397

Query: 432 PGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAIARELIEPERLQ 491
            GF++  A+ +       L+E+FGGH  AAGL+L  ++ P F   F+ +  + I  E+  
Sbjct: 398 HGFNVHSAIESCS----DLLEQFGGHMYAAGLTLPVENVPAFIERFERVVTDTITEEQKI 453

Query: 492 AVLYTDGELPPGAATLALARQLREAGPWGQAFPEPLF--DNLFDCAGWKLMGERHLRLQL 549
             +  D  +     T      +R+  P+G     P+F  + ++D    +++G+ HL+L+L
Sbjct: 454 PQIEIDAPINLKQITRNFYNIIRQMEPFGPGNMRPVFVSECVYDTGSVRVVGDSHLKLRL 513