Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 587 a.a., single-stranded-DNA-specific exonuclease RecJ from Pectobacterium carotovorum WPP14

 Score =  485 bits (1249), Expect = e-141
 Identities = 283/618 (45%), Positives = 377/618 (61%), Gaps = 55/618 (8%)

Query: 3   VLQLRRRESKGAPRGWPDSVHPVLQRIYAARGVLEPGQAEHRLARMLSPQLLGGMAQAVE 62
           + QLRRR         PD+V P+L+R+YA RGV    + E  L+ +L+ +LL G+ +A++
Sbjct: 4   ITQLRRRPL-AEDIDLPDTVPPLLRRLYAQRGVKGAQELERSLSGLLNYRLLSGIDKAID 62

Query: 63  LLVEAIRDDWAILIAGDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFV 122
           LL   + +   I+I GD+D DGAT TA+ V  LR +G   V Y +PNRF +GYGLSP  V
Sbjct: 63  LLQHTLAEKRCIVIVGDFDADGATSTALTVLALRSMGGVNVKYLVPNRFENGYGLSPEVV 122

Query: 123 ASLQPT-PQLIVTVDNGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPE 181
           A       ++IVTVDNG++S AGV  A  RGI V+VTDHHLPGE LPA DA++NPN+   
Sbjct: 123 AQAAALGAEVIVTVDNGISSHAGVEDAHRRGIAVLVTDHHLPGEILPAADAMINPNL--P 180

Query: 182 KCGQGSPLFDSRVQDARMKNLAGVGVMFYLLLALRAKLHGQGAF--------GAAKPDLS 233
            C   S            K LAGVGV FYL++AL  +L     F        G AKP+L+
Sbjct: 181 DCQFPS------------KALAGVGVAFYLMMALFVRLRDSDWFTQPFFTQQGLAKPNLT 228

Query: 234 PLLDLVALGTVADLVPLDFNNRVLVEAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDL 293
            LLDLVALGTVAD+VPLD NNR+LV  GL R+R+G    GI AL+EV  R  + L S+DL
Sbjct: 229 ELLDLVALGTVADVVPLDANNRILVAQGLNRIRAGECRPGIRALLEVANRDASQLVSSDL 288

Query: 294 AFTVGPRLNAAGRLEDMRLGVACLLTDDAAQARRHAEQLDAINRERRDLQASMVAEAELM 353
            F +GPRLNAAGRL+DM +GV  LL++D  QAR  A  LDA+N++RR+++  M  EA  +
Sbjct: 289 GFAIGPRLNAAGRLDDMTVGVELLLSNDITQARMLANDLDALNQDRREIEQGMQVEALRL 348

Query: 354 AASLGHTDA---VGVALFEPSWHAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPF 410
             SL  T      G+A++ P WH GVVG++AS++KER HRPVIAFAPA            
Sbjct: 349 CESLERTRTELPYGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPA------------ 396

Query: 411 DSGAQEVRTGNTQLRGSARSIPGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDY 470
                    G+  L+GS RSI G H+RDAL  +D   PG++++FGGHAMAAGLSL  D +
Sbjct: 397 ---------GDGMLKGSGRSISGLHLRDALERLDTLYPGMMDKFGGHAMAAGLSLHEDRF 447

Query: 471 PRFAAAFDAIARELIEPERLQAVLYTDGELP-PGAATLALARQLREAGPWGQAFPEPLFD 529
             F   F  +  E ++P +L+ V+++DGEL  P    L+ A  LR AGPWGQAFPEP FD
Sbjct: 448 DDFRQRFGELVGEWLDPSQLEGVVWSDGELALPELDLLSTAEMLRYAGPWGQAFPEPTFD 507

Query: 530 NLFDCAGWKLMGERHLRLQLRD-PRDGAVH--DAVMFNAYHGQPPPPRLR---AAYELTI 583
             F     +L+ ERHL+         GAV   D + FN      P P ++     Y L I
Sbjct: 508 GCFRILQPRLLKERHLKAMFEPIGATGAVPLLDGIAFNVDTTIWPDPSIKEVEMVYRLDI 567

Query: 584 NDWQGRESPRLLLRHIEP 601
           N+++G+ S +L+++H+ P
Sbjct: 568 NEFRGKRSVQLMIQHLWP 585