Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 573 a.a., Single-stranded-DNA-specific exonuclease RecJ from Alteromonas macleodii MIT1002

 Score =  451 bits (1160), Expect = e-131
 Identities = 268/609 (44%), Positives = 365/609 (59%), Gaps = 50/609 (8%)

Query: 3   VLQLRRRESKGAPRGWPDSVHPVLQRIYAARGVLEPGQAEHRLARMLSPQLLGGMAQAVE 62
           +L + RRE  GA       +HPV+ RIY  R +      E+ L  +    +L GM QA +
Sbjct: 2   ILPIVRREVTGASLS--SDLHPVIDRIYRGRNIANLDDLENGLKGLTHFNVLKGMPQAAQ 59

Query: 63  LLVEAIRDDWAILIAGDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLS-PAF 121
           +L  A+  +  I+I GD+D DGAT T+V +  LR +G   VD+ +PNRF  GYGLS P  
Sbjct: 60  ILANAVVQNKRIIIVGDFDADGATSTSVCILALRAMGYHNVDFLVPNRFDFGYGLSVPIV 119

Query: 122 VASLQPTPQLIVTVDNGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPE 181
             + +   ++IVTVDNG++ + GV  A++ G++V+VTDHHLPG+ LP  DA+VNPN    
Sbjct: 120 DEAAKQGAEVIVTVDNGISCIDGVTHAKSLGMQVVVTDHHLPGDVLPPADAIVNPN---- 175

Query: 182 KCGQGSPLFDSRVQDARMKNLAGVGVMFYLLLALRAKLHGQGAF---GAAKPDLSPLLDL 238
              Q    F S       KNLAGVGV FY++LAL+A+L  QG F   G A P+L+ LLD+
Sbjct: 176 ---QPGCEFPS-------KNLAGVGVAFYIMLALKAELQQQGHFERAGLAPPNLASLLDI 225

Query: 239 VALGTVADLVPLDFNNRVLVEAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVG 298
           VA+GTVAD+V LD NNR+LV  GLQR+R+G+   GI ALVEV  R  A L STDL F VG
Sbjct: 226 VAVGTVADVVVLDKNNRILVHQGLQRIRAGKCRPGIKALVEVANRDCAHLTSTDLGFVVG 285

Query: 299 PRLNAAGRLEDMRLGVACLLTDDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASLG 358
           PRLNAAGRL+DM  G+ACLL D+  QAR  A +LDA+N+ERR+++  M A+AE++   + 
Sbjct: 286 PRLNAAGRLDDMSQGIACLLEDETIQARMIAAELDALNKERREIETGMKAQAEIVLEQMA 345

Query: 359 HTDA---VGVALFEPSWHAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQ 415
             +      + ++   +H GV+G+VA +LKE+  +PVIAFA                   
Sbjct: 346 LDEGDMPSALVVYREDFHQGVIGIVAGRLKEKYLKPVIAFA------------------- 386

Query: 416 EVRTGNTQLRGSARSIPGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAA 475
                +  ++GSARSIPG HIRD L  ++ R PG+IE+FGGHAMAAGLSL       F  
Sbjct: 387 --HQDDEIIKGSARSIPGVHIRDVLDEVNTRYPGVIEKFGGHAMAAGLSLPVAKLQEFEQ 444

Query: 476 AFDAIARELIEPERLQAVLYTDGELPPGAATLALARQLREAGPWGQAFPEPLFDNLFDCA 535
           AF  IAR  +        L +DG+L      L  A  LR+AGP+GQ F  PLFD  F   
Sbjct: 445 AFVDIARAHMAKLDGNHALLSDGDLSSKELCLPFAHLLRQAGPFGQGFESPLFDGEFALL 504

Query: 536 GWKLMGERHLRLQLRDPRDGAVH-DAVMFNAYHGQPP---PPRLRAAYELTINDWQGRES 591
             +L+G++HL++ L+   DGA   DA+ FN      P     R+  AY L IN ++G+E+
Sbjct: 505 DQRLVGQKHLKMVLKS--DGANEVDAIAFNVDLKSWPNAMVKRVHIAYRLDINVFRGQET 562

Query: 592 PRLLLRHIE 600
            +L++  IE
Sbjct: 563 VQLIVEQIE 571