Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Rhodanobacter sp000427505 FW510-R12

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  296 bits (759), Expect = 2e-84
 Identities = 181/412 (43%), Positives = 249/412 (60%), Gaps = 23/412 (5%)

Query: 6   LEVTIGHCYKRAREQRHEFMTVEHLLLALTENQ--SALGALRACGADLPRLSADLERIIN 63
           L++ I      A    H  +   HLL AL E Q  S    L   G D+  L   L + ++
Sbjct: 10  LQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQGLVKELD 69

Query: 64  ETVPVL-PPGDERDTQPTLGFQRVLQRAVYHVQSSGRKEVTGANVLVAIFGEKDSHAVYF 122
           +   +  P GD   +Q      R+L +A    Q  G + ++   VL+A   E        
Sbjct: 70  QLPKIQNPTGDVNMSQD---LARLLNQADRLAQQKGDQFISSELVLLAAMDENS------ 120

Query: 123 MHQQEITRLDVVNYISHGIAKIGDEPAAG-VSGGEREGEEGGEPKGNPLHEFASNLNELA 181
               ++ +L     +S G++K   E A   + GG    +   E     L ++  +L + A
Sbjct: 121 ----KLGKL----LLSQGVSKKALENAINNLRGGAAVNDANAEESRQALDKYTVDLTKRA 172

Query: 182 LEGKIDPLIGRADEIERTIQVLCRRRKNNPLYVGEAGVGKTALAEGLAKRIVDGEVPEVL 241
            EGK+DP+IGR DEI RT+QVL RR KNNP+ +GE GVGKTA+AEGLA+RI++GEVP+ L
Sbjct: 173 EEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGL 232

Query: 242 ESATIWSLDLGALVAGTKYRGDFEKRLKGVIAQLKKQPGAI-LFIDEIHTIIGAGSASGG 300
           +   + +LD+GAL+AG KYRG+FE+RLK ++ +L KQ G I LFIDE+HT++GAG   G 
Sbjct: 233 KGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGA 292

Query: 301 TMDASNLIKPMLASGELRCIGSTTFQEYRGVFEKDRALARRFQKIDVVEPTVADSIEILK 360
            MDA N++KP LA GEL C+G+TT  EYR   EKD AL RRFQK+ V EP+  D+I IL+
Sbjct: 293 -MDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILR 351

Query: 361 GLRSRFEEHHHVAYTNEALKAAVDLSVKHIPDRLLPDKAIDVIDEAGARQRL 412
           GL+ R+E HH VA T+ A+ AA  LS ++I DR LPDKAID+IDEA +R R+
Sbjct: 352 GLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRM 403



 Score =  265 bits (678), Expect = 6e-75
 Identities = 162/429 (37%), Positives = 248/429 (57%), Gaps = 29/429 (6%)

Query: 333 EKDRALARRFQK----IDVVEPTVADSIEILKGLRSRFEE----HHHVAYTNEALKAA-- 382
           E+D A  +R +K    I+ +E   +D  EI    ++  +        +  + + L+AA  
Sbjct: 432 EEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARR 491

Query: 383 -------VDLSVKHIPDRLLPDKAIDVIDEAGARQRLLPEDQRTGKVDVGEVEYIVAKMA 435
                   +L    IPD    ++++ ++D+ G     L  +    KV   E+  +V+K  
Sbjct: 492 KGDLNRMAELQYGVIPDL---ERSLQMVDQHGKTDNQLLRN----KVTEEEIAEVVSKWT 544

Query: 436 RIPAKQVSASDRDVLRNLERNLKMVVFGQDPAIEALAASIKMARSGLADPSKPIGCFLLA 495
            IP  ++   +R+ L  +E  L   V GQ  A+ A+A +++ +R+GL+DP++P G FL  
Sbjct: 545 GIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFL 604

Query: 496 GPTGVGKTEVTKQLAMQL---GIEMIRFDMSEYMEAHSVSRLVGAPPGYVGFDQGGLLTE 552
           GPTGVGKTE+ K LA  L      M+R DMSE+ME HSV+RL+GAPPGYVG+++GG LTE
Sbjct: 605 GPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTE 664

Query: 553 AVTKHPHAVLLLDEIEKAHPDVFNILLQVMDRGVLTDTNGREANFKNVVVVMTTNAGAAI 612
           AV + P++V+LLDE+EKAHPDVFN+LLQV++ G LTD++GR  +F+N V+VMT+N G+A 
Sbjct: 665 AVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSA- 723

Query: 613 AARRSMGFVEQKHESDAMEVIRRIFTPEFRNRLDAIIQFGALDFEHILRVVDKFLIELES 672
             +  +G  E +  +  M+ +   F PEF NR+D ++ F  L  E I  + +  L  L S
Sbjct: 724 QIQELVGDREAQRAA-VMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRS 782

Query: 673 QLTEKRVSLDVGADARRWLAEHGFDPQMGARPMARVIQEKVKRALADELLFGKLAEGGVV 732
           +L E+ +SL +  +A   L   G+DP  GARP+ R IQ  ++  LA  +L GK   G  +
Sbjct: 783 RLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKFLPGTAI 842

Query: 733 RLSVADGEL 741
              V   E+
Sbjct: 843 TAKVEGDEI 851