Pairwise Alignments

Query, 343 a.a., hypothetical protein from Rhodanobacter sp000427505 FW510-R12

Subject, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 75  DSAVVVFDTAQRKVVAIIPDVSSVHGVLYVPELDRVYASATGADEVVAIDAKTFKIIART 134
           D+++ + D    +V   +P      G+L   +   +Y  A+ +D V  +D  T KII   
Sbjct: 39  DNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKIIKEL 98

Query: 135 PAGDYPDGMAYAPDVHKLYVSDEHGGTDTVIDVRSNARVATIPLGGEVGNTQYDPVTRHI 194
           P+G  P+  A  P+   LYVS+E     TVID  ++  +  I +G E       P  +  
Sbjct: 99  PSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEPEGMAVSPDGKWA 158

Query: 195 FANVQTRRQLVEIDPATDRVISRISLPGAVGNHGLYIDGASRLAFIACEDNSKLLVLDLT 254
               +T   L  ID +T + ++  +L         +    SRL + + E    + +LD+T
Sbjct: 159 VNTSETTNMLHWIDTST-QTLADSTLVDQRPRFVEFSKDGSRL-WASAEIGGTVTILDVT 216

Query: 255 SRKVQATFDVADDPDVLAFDASLGWLYVAGESGEVSIFKVTGQAVRPLATAMLGPNAHVV 314
           +R+V  T               L +        +V    +   A    A   LGP  HV 
Sbjct: 217 TRQVLKT---------------LNFQIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVA 261

Query: 315 AVDGTT 320
            +D  T
Sbjct: 262 VIDAKT 267



 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 66/297 (22%), Positives = 111/297 (37%), Gaps = 19/297 (6%)

Query: 8   TLCRGLMALVAFASLFITTPACSGANSPGSRLPLTTLAEVPLPGRATRWDYASLDERSHL 67
           +L  G +AL +  ++  T    +  ++  S + L TL          R     L   S L
Sbjct: 14  SLLSGALALASSHTMAATAWVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKL 73

Query: 68  LFLAHLGDSAVVVFDTAQRKVVAIIPDVSSVHGVLYVPELDRVYASATGADEVVAIDAKT 127
           L++       V V D A RK++  +P           P    +Y S      V  ID  T
Sbjct: 74  LYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVT 133

Query: 128 FKIIARTPAGDYPDGMAYAPDVHKLYVSDEHGGTDTVIDVRSNARVATIPLGGEVGNTQY 187
            K++ +   G  P+GMA +PD      + E       ID  +     +  +       ++
Sbjct: 134 DKVLGQIEVGIEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEF 193

Query: 188 DPVTRHIFANVQTRRQLVEIDPATDRVISRISL------PGAVGNHGLYIDGASRLAFIA 241
                 ++A+ +    +  +D  T +V+  ++       P  V   G+ +    + AF+A
Sbjct: 194 SKDGSRLWASAEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVA 253

Query: 242 CEDNSKLLVLDLTSRKVQATFDVADDPDV------LAFDASLGWLYVA-GESGEVSI 291
               + + V+D        TFDV D   V      LAF      L    G SG+VS+
Sbjct: 254 LGPANHVAVID------AKTFDVLDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSV 304



 Score = 36.6 bits (83), Expect = 9e-07
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 10/145 (6%)

Query: 43  TLAEVPLPGRATRWDYASLDERSHLLFLAHLGDSAVVVFDTAQRKVVAII--------PD 94
           TLA+  L  +  R+   S D  S L   A +G + V + D   R+V+  +        PD
Sbjct: 177 TLADSTLVDQRPRFVEFSKDG-SRLWASAEIGGT-VTILDVTTRQVLKTLNFQIKGVHPD 234

Query: 95  VSSVHGVLYVPELDRVYASATGADEVVAIDAKTFKIIARTPAGDYPDGMAYAPDVHKLYV 154
                G+    +    + +   A+ V  IDAKTF ++     G     +A+ PD  +L  
Sbjct: 235 KVQPVGIKLSADGKYAFVALGPANHVAVIDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLA 294

Query: 155 SDEHGGTDTVIDVRSNARVATIPLG 179
           ++   G  +VID +    + ++ +G
Sbjct: 295 TNGVSGDVSVIDAKQLKVLKSVKVG 319



 Score = 30.0 bits (66), Expect = 9e-05
 Identities = 18/70 (25%), Positives = 31/70 (44%)

Query: 78  VVVFDTAQRKVVAIIPDVSSVHGVLYVPELDRVYASATGADEVVAIDAKTFKIIARTPAG 137
           V V D     V+  +     V  + + P+  ++ A+   + +V  IDAK  K++     G
Sbjct: 260 VAVIDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSVKVG 319

Query: 138 DYPDGMAYAP 147
            YP G+   P
Sbjct: 320 RYPWGVVVTP 329