Pairwise Alignments

Query, 867 a.a., DNA gyrase subunit A from Rhodanobacter sp000427505 FW510-R12

Subject, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

 Score =  392 bits (1008), Expect = e-113
 Identities = 273/764 (35%), Positives = 414/764 (54%), Gaps = 78/764 (10%)

Query: 8   VIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVYNKPYKKSA 67
           V R ++ D   Q+YL+Y+M VI+ RALP + DGLKPV RR+++AM+ELG   +  +KKSA
Sbjct: 12  VERRSLADFTEQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSA 71

Query: 68  RVVGDVIGKYHPHGDQSVYDAIVRLAQPFSLRYMLVDGQGNFGSVDG-DSAAAMRYTEVR 126
           R VGDV+GK+HPHGD + Y+A+V +AQPFS RY LVDGQGN+G+ D   S AAMRYTE R
Sbjct: 72  RTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEAR 131

Query: 127 MSRLSHELLADIDKETVDFGPNYDESEQEPLVLPTRVPNLLVNGSAGIAVGMATNIPPHN 186
           +SR +  LL+++ + TVD+ PN+D + QEP VLP R+PN+L+NG+ GIAVGMAT++PPHN
Sbjct: 132 LSRYAEVLLSEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHN 191

Query: 187 LNEVIAATIALIDEPALSIDDLMHYIPGPDFPTHG-IINGSSGIIEAYRTGRGRILVRAK 245
           L EV +A + L+DEP  +I+ L  +I GPD+PT   I+   + I++ Y +GRG I +RA 
Sbjct: 192 LREVASACVRLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAV 251

Query: 246 AEIETEPNGRETIIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDG-MRVVI 304
             +E        I+V  LP+QV+ A+++E+IA  ++ KKL  +++LRDESD +   R+VI
Sbjct: 252 YRVED-----GDIVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVI 306

Query: 305 EIRKDAMG-DVVLNNLFQQTQLQVTFGINM-VALLDGQPKLLNIKDILEAFIRHRREVVT 362
             R + +  D ++ +LF  T L+ T+ +N+ +  LDG+P+L N++ +L  ++  R   V 
Sbjct: 307 IPRSNRVDVDELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVR 366

Query: 363 RRTIFDLRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVVRRWEAGLVRTL 422
           RR    L K   R H+L+GL  A  N+DE+I +I+T   P +A    ++ R+E       
Sbjct: 367 RRLQHRLDKVEKRLHLLDGLLTAFLNLDEVIHIIRTEEYPKQA----LIERFE------- 415

Query: 423 LSASGAGASRPEDMDPRDGLKADGYQLSEAQALEILAMRLHRLTGLEQEKLSDEYRQILE 482
                                     L+E QA  IL  RL +L  LE+ K+  E  ++L+
Sbjct: 416 --------------------------LTEIQADYILETRLRQLARLEEMKIRGEQDELLK 449

Query: 483 TIRGLIEILENPDRLLQVIREELEAIKAEFGDARRTEI--QHSQEDLNVLDLITPEDVVV 540
               L  +L +  +L +++R EL      +GD RR+ I  +   + L+  +L+  E V V
Sbjct: 450 EQAKLQALLGSEAKLRKLVRSELIKDAETYGDDRRSPIVARAEAKALSENELMPTEPVTV 509

Query: 541 TLSHTGYV---KRQPASAYRAQRRGGRGRSASALKDEDVVEQLWVVNTHDTLLTFTSTGR 597
            LS  G+V   K     A     + G G  A+A              ++   +   STGR
Sbjct: 510 VLSEKGWVRCAKGHDIDATGLSYKAGDGFKAAA-----------AGRSNQFAVLIDSTGR 558

Query: 598 VYWLKVYQMPEAGSGARGKPIINLLPLGEGEKVQAVLPVREYGDDRYVFFATKHGTVKKT 657
            Y L  + +P A    +G+P+   L    G   + VL      DD     A+  G     
Sbjct: 559 SYSLAAHSLPSA--RGQGEPLTGRLTPPPGATFECVLLP---DDDALYVVASDAGYGFVV 613

Query: 658 PLTEFAYQLQKGKQAIKLDEGDALVNVE-LTDGNSD-ILLFASNGKVNRFDENTVRSMGR 715
              +   + + GK  + L  G  ++    + D   D +    + G++  F  + +  +G+
Sbjct: 614 KGEDLQAKNKAGKGLLSLPNGAKVMTPRPVADREQDWLAAVTTEGRLLVFKVSDLPQLGK 673

Query: 716 ----TATGVRGMRLADGAE-VVSLIVAAQGDILTATARGYGKRT 754
                  GV G R+A   E V  L V  +G  L   A   GKRT
Sbjct: 674 GKGNKIIGVPGDRVASREEFVTDLAVIPEGATLVLQA---GKRT 714