Pairwise Alignments

Query, 415 a.a., TolC family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 480 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 99/398 (24%), Positives = 153/398 (38%), Gaps = 47/398 (11%)

Query: 28  LPQAVARALAHNPAIRAGDRTVVAAERQADLAGLAPPWVVGAEVE--------------N 73
           L + V +A+A N  +R     +  A  Q   A  A  W +GA+ E              +
Sbjct: 66  LDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGWSLGAKAEAQRLQESGEAFLLAD 125

Query: 74  VAGSGSLAGVGAAET-TLRLGRVLERGGKRDARVAAGAIDIERSRNALEQVRLELATEAA 132
               G++  VG   +    L   L+RG      + +     + ++ A +  R+ L  +  
Sbjct: 126 KVPVGNIGSVGITTSYQFDLFGTLQRG------IESAQASADAAQAAADIARITLVADVV 179

Query: 133 RRFVEVLADQARTTLAAQDLALAHELTATVRRWVQAGRSPESDL--DLMQIAEARADIEV 190
           R + +V A      +A + L L  + T   +R   AGR  E+ +     Q    RAD+  
Sbjct: 180 RSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSLRADMPR 239

Query: 191 EHASHELASARVSLAALWHAAEP--DFDAVAGNLFELPAVPSY------AALISRLPD-N 241
             A  +    R+S+      A+P     A  G   ELP +         A L+ R PD  
Sbjct: 240 YEALRQAGLFRLSMLL----AKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPDVR 295

Query: 242 PALRGLALDAHAARARERVAAASAKPDVTWHVGVRRLSTFNDTALIAGVSLPLGSAGRSA 301
            A R LA    AA AR  VA  +  PD++    V  +   ++    A      G      
Sbjct: 296 QAERQLA----AATARIGVATGALYPDISIGATVGTVGLLDNLGQPATNRWGFGPMISWT 351

Query: 302 LSVAQSEAETEAADARAQAQQMDVRQRLFSAYQEMVHARTAFEAHRDRMIPKAEA----- 356
           +    + A    A+A  Q         + +A +E       + A   R    AEA     
Sbjct: 352 VPTNGARARVHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAK 411

Query: 357 -ALALTRKGFEAGRFSFVALSQAQRTLLELRNAQIDAA 393
            A   T + F+AGR SF+A  QA RT  ++R AQ+ AA
Sbjct: 412 EAAGQTHRFFQAGRASFLADLQATRTYTDVR-AQLAAA 448