Pairwise Alignments

Query, 439 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

 Score =  260 bits (665), Expect = 6e-74
 Identities = 162/397 (40%), Positives = 220/397 (55%), Gaps = 21/397 (5%)

Query: 33  AAPAGTPVSSSASAKEILYWYDPMEPAQHFPKPGKSP-MGMEMVPKYADDGEQAG--GVR 89
           A PA  P  + A+ ++ LYWYDPM P QHFP PGKSP M M++V KYA++G       V+
Sbjct: 28  AQPAQAP--AIATEQKPLYWYDPMYPQQHFPAPGKSPFMDMQLVAKYAEEGTDPAEPAVQ 85

Query: 90  IDPGTVQNLGIRTTPVERRVLSTAVWVPGTVTWNPREATTVSARVDAVINKLWVRAPYTQ 149
           I  G  QNLG+R   V R  L   + V G + ++ R+ + + AR    + + + RA    
Sbjct: 86  ISQGVQQNLGVRLATVSRGRLQRTLQVSGVLAFDERDFSVLQARTAGFVERTYGRATGDV 145

Query: 150 VTAGEPLAELLAPQWGSALAEYDALQGAQSADAKALRVAARERLRVLGLTAAEI-RTARR 208
           V  G PLA++LAP+W     E+ AL+         L  AAR+RL + G+    + R AR 
Sbjct: 146 VAKGAPLADVLAPEWAGLQEEFLALRHLGDVQ---LLAAARQRLLLAGMPGELVDRVARS 202

Query: 209 G-AGAAITLDAPQTGMVTALEVQEGQRVGAGQTLMTLNSLATVWVEAALPQAVAGTVHSG 267
           G     +TL AP  G++ AL+++ G  V  G TL  +N +A VW+EAA+P+A A  +H G
Sbjct: 203 GKVQNQVTLVAPSAGVIQALDLRPGMTVTPGATLARINGIANVWLEAAVPEAQASGLHEG 262

Query: 268 TPVTVSADALPGQVFQGSVETLLPDLDNATRTQRARIVLANPRAQLSPGMFVTVQLNP-V 326
             V     A PG+  QG +  LL D D  +RT R RI L N   +L PGM   V L P  
Sbjct: 263 QAVEAHLPAYPGETVQGKLTALLADADLQSRTLRLRIELPNKDGRLRPGMTAQVSLRPGE 322

Query: 327 AGEAVAVVPSDALIATGVQTRVIVAEADGRFRPLAVRTGRSADGYTEILDGLQGGEKVVV 386
             +   ++P++A+I TG +  V+VAE  GRFRP+ V  G+   G   IL GLQ G+KVV 
Sbjct: 323 NADDSLLLPAEAVIRTGKRDLVMVAEDQGRFRPIEVVLGQENGGQVAILKGLQAGQKVVA 382

Query: 387 SGQFLIDSEASLSGALERLGEGGTVPAAATSASQPAT 423
           SGQFLIDSEASL G          + A   S S PA+
Sbjct: 383 SGQFLIDSEASLKG----------IEATTASDSPPAS 409