Pairwise Alignments

Query, 423 a.a., TolC family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 101/417 (24%), Positives = 164/417 (39%), Gaps = 37/417 (8%)

Query: 8   RRLLAPGLATLLWGAVATAAAAAEPPLTFATAVQRGLAHAPQVEARAADVAAMHEEAARA 67
           ++LL  G+   LW     A+AA    LT  +A+Q   A+ P + A   ++        +A
Sbjct: 6   KKLLGAGV---LW---VVASAAQAQTLTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQA 59

Query: 68  GRLPDPALSFGVASYPVTAPGAFSLRSDGATMRTVGVMQAIPSRAARVAERGLANAQIDA 127
           G +P+P  S+ V             R D  T  ++ + QA+     R A   +A+   DA
Sbjct: 60  GLIPNPVASWDVED----------TRRDSRTT-SIKISQALELGGKRGARIDVASRVQDA 108

Query: 128 AAANRVATTQTVQERVADAWIDVWATELARSLLVELRGESTLAVETTQARLHGGEGGASD 187
           AA        +++  V D +      +    L       +   +     R+  G+  AS 
Sbjct: 109 AALTLEQRRNSLRAEVIDNYYGALRAQERLDLAQRSMTLAERGLVVANGRVTAGK--ASP 166

Query: 188 ALAARAAASLLDNRLEATDADLAAAQASLQRWVGPITGPLA--------EAPDFGRLPVS 239
             A RA   L + RLE   A +    A   R +   TG  A          P    +P +
Sbjct: 167 VEATRAQVQLSEIRLERDRAQMGLTDA--YRRLAASTGSAAPNFQAVATRNPSTLAVPSA 224

Query: 240 EQSLQRSIDEQAPMQAWEARERVAQAALDQARAAKHPDWSVSAEYGKRAPRMSDMVTVQF 299
            Q L R +++ A ++  E      +A++   +A + PD  VS      A     +  V  
Sbjct: 225 TQLLAR-LEQTAELRLAELSILQYEASIGLEKAQRIPDLDVSIGSQYDASVRERVSLVGV 283

Query: 300 SVSLPLFTRNRQDRGISARQAQ--RDAVQADHEDARRAQQEAVARAAATWEGWNRQIARY 357
           S+ +PLF RN+ +   + R+A   RD   A     R   ++AV      W+  N ++  +
Sbjct: 284 SMPIPLFNRNQGNVLAATRRADQARDLRNATELRLRTETRQAVD----LWQSANTEVRVF 339

Query: 358 QQTLLPLARDRAQTALAGYRGGGV-LQPWLDARRDEIELRLSYAAALASRARLWASL 413
            Q +LP A+    +A  G+  G       LDA+R  I  R  Y  A A     W  +
Sbjct: 340 NQQILPAAQSAVDSATRGFEMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRI 396