Pairwise Alignments

Query, 423 a.a., TolC family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

 Score =  200 bits (509), Expect = 6e-56
 Identities = 134/390 (34%), Positives = 191/390 (48%), Gaps = 8/390 (2%)

Query: 9   RLLAPGLATLLWGAVATAAAAAEPPLTFATAVQRGLAHAPQVEARAADVAAMHEEAARAG 68
           R+LA  L  LL      A +A    LT   A+Q    +AP ++AR    +A       AG
Sbjct: 10  RMLAAALVLLL-----PALSAQANSLTLDDALQLAERNAPSLQARQEQASAARHSVVPAG 64

Query: 69  RLPDPALSFGVASYPVTAPGAFSLRSDGATMRTVGVMQAIPSRAARVAERGLANAQIDAA 128
            LPDP L+ GV + PV     +S   D  TM+ VG+ Q +P+R  R A    A A ++ A
Sbjct: 65  ELPDPRLNLGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRDKRKARVETAQATVERA 124

Query: 129 AANRVATTQTVQERVADAWIDVWATELARSLLVELRGESTLAVETTQARLHGGEGGASDA 188
            A  +     V+   A AWI  +  +        L  E+ L     +ARL  G G ++DA
Sbjct: 125 DAEALFERLKVRAATAQAWITAYTLQRKLQQFDMLFNENRLLAAAVRARLAAGGGASADA 184

Query: 189 LAARAAASLLDNRLEATDADLAAAQASLQRWVGPITGPLAEAPDFGRLPVSEQSLQRSID 248
           LA    A+ L+ + +        A+A+L+RW+G      A+AP F + PV       ++ 
Sbjct: 185 LAPGQEAAQLEEQKDQLLTQATQARAALKRWIGQDAD--AQAPAFPQWPVRAPDYLHTLH 242

Query: 249 EQAPMQAWEARERVAQAALDQARAAKHPDWSVSAEYGKRAPRMSDMVTVQFSVSLPLFTR 308
               + A+ A  R AQA + QA A K  DW    +Y +R P  S+MV+VQ S  LPLF+ 
Sbjct: 243 AHPELAAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQRRGPEFSNMVSVQVSFQLPLFSG 302

Query: 309 NRQDRGISARQAQRDAVQADHEDARRAQQEAVARAAATWEGWNRQIARYQQTLLPLARDR 368
           +RQD  I+AR+AQ   ++ + E A R     +    A ++   R + R + TLLPLA  R
Sbjct: 303 SRQDPMIAARRAQVRQLEDEQEAALREHTAQLEADLAEYQRLQRAVTRSRDTLLPLAEQR 362

Query: 369 AQTALAGYRGG-GVLQPWLDARRDEIELRL 397
              ALA YR G   L+  L ARR  +E RL
Sbjct: 363 VSLALADYRAGKSALEEVLTARRQRVEARL 392