Pairwise Alignments

Query, 1082 a.a., multidrug efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 538/1061 (50%), Positives = 729/1061 (68%), Gaps = 39/1061 (3%)

Query: 1    MPSFFIDRPIFAWVVAILIALGGVLSILNLGVESYPSVAPPSVVVNAVYPGASADTTEKN 60
            MP FFIDRP+FAWVVA+ I L G L+I  L V  YP+VAPP V + AVYPGASA T +++
Sbjct: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60

Query: 61   VTQVIEQQLTGIDHLLYFSSSSSSSGRASITLTFENGTNPDIAQVQVQNKVSLATPRLPS 120
            V  +IEQ+L G D+LLYF S SS  G A+IT TF  GT+PD+AQV VQN++ +   RLP 
Sbjct: 61   VVSLIEQELNGADNLLYFESQSSL-GSATITATFAPGTHPDLAQVDVQNRLKVVESRLPR 119

Query: 121  EVTKQGVVVAKANTGFLEVVALRSDNPAIDRARLNDIVASQVLDQIARVPGVGSTQQFGG 180
             VT+QG+ V K +TGFL +  L S++  +D   L+DI+A  V+D+I R+ GVG  Q +G 
Sbjct: 120  PVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGS 179

Query: 181  EYAMRIWLDPDKLQGYGLSASQALAAVTAQNVQFAAGSLGSDPAANGQGISVTVATEGRF 240
            E AMRIW+DP KL G+ L+ +    A+ AQN Q A GS+G  P+ + Q I+  V  +G+ 
Sbjct: 180  ERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQL 239

Query: 241  TTPEQFENIILRANNDGTTVKLGDVAWVSFGAGVYGFNTTYNGLPVAAFAIQLLPGANAL 300
            ++P++F  I+LRAN DG+TV +GDVA V  GA  Y + T  NG P  AF++QL PGANA+
Sbjct: 240  SSPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAM 299

Query: 301  DVATAVHGKMDELAGSFPQGVSWFTPYDSTTFVKVSVNEVVHTLIEAIVLVFLVMLIFLQ 360
            + AT V  KM +LA  FP+GV +  PYD++ FVKVS+ +V++TL EA++LVF VM +FLQ
Sbjct: 300  ETATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQ 359

Query: 361  NIRATIIPTLVIPVALLGTFIGMLLLGFTINQLTLFGMVLAIGIVVDDAIVVIENVERIM 420
            N+R T+IPTLV+PVAL+GTF  ML +GF++N LTLFGMVLAIGI+VDDAIVV+ENVERIM
Sbjct: 360  NLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIM 419

Query: 421  TEDGLSPKEATKKAMGQITGAVVGITVVLIAVFVPSSFQPGAAGVIYKQFALTIAMSVAF 480
             E+GL PK+AT+KAMGQI+GA+VGIT+VL+AVF+P +F  G+ GVIY+QF+L++A+S+ F
Sbjct: 420  AEEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILF 479

Query: 481  SAFLALSFTPALCASFLTPV----HEEKKNFVFRWFNTAFGKITHTYTGHIGSAVRHAPR 536
            SAFLALS TPALCA+ L PV    H E+K F F WFN  F  +++ Y   +  A++ + R
Sbjct: 480  SAFLALSLTPALCATLLKPVAKGEHHERKGF-FGWFNRRFESMSNGYQRWVVQALKRSGR 538

Query: 537  WVMVFVLISVLTGFLYTRLPGSFLPEEDQGFALAVVQLPPGASLQRTNAVMRQILTVLKQ 596
            +++V+ ++  + G+ +++LP +FLP EDQG+ +  +QLPPGAS  RT  V  QI     +
Sbjct: 539  YLLVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAHNAE 598

Query: 597  DPAVDGVVQIAGFSFLGMGENVGMSFIRLKPWGERGWAPDQKAAQEQHDKLVKEGKAKPI 656
            +P V     I GFSF G G+N  ++F  LK W ERG A D                    
Sbjct: 599  EPGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERG-ADD-------------------- 637

Query: 657  DLGVTAAEFIQRANGAVQSVRDAQIFIVNVPTVQGLGQFGGFDMYLQDRGGTGRDALTAA 716
                +A     RA  A   ++DA  + V  P + GLG+  GF+  LQDRGG G   L AA
Sbjct: 638  ----SAQSIADRATMAFTQLKDAIAYSVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAA 693

Query: 717  RNTLLGAASQNPLLVGVRPNGLEDAPQLRLDVDRTQALSMGLSVGDIYNAISLMLAPVYV 776
            R+ LL +AS++ +L  VR   L ++PQ++L++DR QA ++G+S  DI   + + +   YV
Sbjct: 694  RDQLLESASKSKVLTNVREASLAESPQVQLEIDRRQANALGVSFADIGTVLDVAVGSSYV 753

Query: 777  NDFSYGGRVKRVIMQADSPHRMGPEAFQHIFTPSTRTNADGTPQMIPLSNVVQAKWQMAS 836
            NDF   GR++RV++QA+   R   E   +I         + + +M+PL   VQA+W    
Sbjct: 754  NDFPNQGRMQRVVVQAEGDQRSQVEDLLNIHV------RNDSGKMVPLGAFVQARWVSGP 807

Query: 837  PSLVRYNGYSAVEIVGSPAPGHASGEAMNIMQKIVSDDLPHGFGYDWTGQSYQEILSGNT 896
              L RYNGY AV I G PA G++SGEAM  ++++V+  LP G G +WTG S QE LSG+ 
Sbjct: 808  VQLTRYNGYPAVSISGEPAAGYSSGEAMAEVERLVA-QLPAGTGLEWTGLSLQERLSGSQ 866

Query: 897  AILLMVLSVVIVFLCLTALYESWSIPVSVLLVVPLGILGAVVFTLLRGLPDDIYFKIGVI 956
            A LLM LS+++VFLCL ALYESWSIP +VLLVVPLG+LGAV+   LRG+P+D++FK+G+I
Sbjct: 867  APLLMALSLLVVFLCLAALYESWSIPTAVLLVVPLGVLGAVLAVTLRGMPNDVFFKVGLI 926

Query: 957  TVMGLAAKNAILIVEFAVIEQRQGRTLREAVVDAARLRLRPILMTSIAFIGGVFPLFVST 1016
            T++GL+AKNAILI+EFA     QG    +A V AARLRLRPI+MTS+AFI GV PL +++
Sbjct: 927  TLIGLSAKNAILIIEFAKHLVDQGVDAADAAVQAARLRLRPIVMTSLAFILGVVPLAIAS 986

Query: 1017 GAGANARHAIGTGVIGGMLFATFLGVLLIPVFYVVVRRLLG 1057
            GA + ++ AIGTGVIGGML AT L V+ +PVF+VVV RL G
Sbjct: 987  GASSASQQAIGTGVIGGMLSAT-LAVVFVPVFFVVVMRLSG 1026