Pairwise Alignments

Query, 340 a.a., IS110 family transposase from Rhodanobacter sp000427505 FW510-R12

Subject, 329 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  152 bits (383), Expect = 1e-41
 Identities = 105/333 (31%), Positives = 172/333 (51%), Gaps = 21/333 (6%)

Query: 5   VGVDVAKATFDVAVGLAKPGKFQTRAKVANREEGFQELMTWLDKHAPEAAVCMEATGIYH 64
           +GVD++K  FD+   L      +T+ K+ N  EGF EL+  L     ++ V MEA+G Y+
Sbjct: 9   IGVDISKVKFDIYFKLGNGE--ETKVKLDNNSEGFSELLNLLPS---DSWVVMEASGPYY 63

Query: 65  EALAIFLVQQGKTVYVANPAQVKYFGKSQLTRTKTDRTDAKLIAQFATSQQAGTHPMAPW 124
             LA FL  +G  V V NP  +K F + +L+RTKTD  DAK IA++    +     + PW
Sbjct: 64  YQLASFLYDKGVMVSVINPLVIKRFTQMKLSRTKTDSADAKSIAEYGNLLK-----INPW 118

Query: 125 MPPTAAQRTLRALVERLDDLKGMERMEANRLD------VANDAVRDSVEASLKELRKQIK 178
            P  +    ++        L   +     +L+        ND +R+S+E  L  + + IK
Sbjct: 119 EPLKSCYLEIKQWYAYRKQLLKHQHAIQMKLEAFISTGTLNDLLRESIENELFRIDENIK 178

Query: 179 ALEQRINNHIDKD-PQLRYDAALMTSIPGIAKTTSASLLAALGDLRRFDAPGKLVAFAGL 237
            +++++N+ ID++  QLR     + S+PGI   TS  L+ AL     F    +++++ GL
Sbjct: 179 EVDRQLNHLIDQENGQLREQ---LESVPGIGPKTSLLLIVALRGFENFQNYKQIISYLGL 235

Query: 238 NPARRESGT-LKGQVRISKTGAPGLRAKLYFPAICAKNHNPVVRAFCERLLARGKLPIVT 296
           +P   ESGT +KG+ +I K G   +R  LY  A  AK++N        RL A+GK   V 
Sbjct: 236 SPRIYESGTSVKGKAKICKMGMSEVRKCLYMAARSAKSYNKTCMELYSRLRAKGKAHRVA 295

Query: 297 VCAAMRKLLHLVWGVIHTNSLFDPDYPRHRLVA 329
           + A + KL+   + ++ +NS +  ++   R+ A
Sbjct: 296 MVAVINKLIKQAFAIVKSNSYYVQNHTTRRVAA 328