Pairwise Alignments

Query, 340 a.a., IS110 family transposase from Rhodanobacter sp000427505 FW510-R12

Subject, 348 a.a., Transposase IS116/IS110/IS902 family protein from Alteromonas macleodii MIT1002

 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 39/257 (15%)

Query: 96  RTKTDRTDAKLIAQFATSQQAGTHPMAPWMPPTAAQRTLRALVERL-------------- 141
           +TK D+ DA  IA+     + G  P+A   P    +R +R L+ R               
Sbjct: 95  KTKNDKIDAYKIAKL---MRGGNFPLAYVYPKE--KRAIRDLLRRRTHAMRHSAELKAFI 149

Query: 142 --------------DDLKGMERMEANRLDVANDAVRDSVEASLKELR---KQIKALEQRI 184
                          DL      +A R    N  V+ S++ +L+ +     ++ ++E  +
Sbjct: 150 KNALSQYNLPVPEKSDLSYTTGRDAMRGYFPNPQVQRSIDMNLRLIEVYDHEVSSIECYV 209

Query: 185 NNHIDKDPQLRYDAALMTSIPGIAKTTSASLLAALGDLRRFDAPGKLVAFAGLNPARRES 244
                 D    Y   L+ S+PG+ +  + ++L  +G ++RFD+  K  +++ L   + ES
Sbjct: 210 EKLTKHDNGRDY--YLLRSLPGVGRVLALTILYEIGTIKRFDSVQKFASYSRLVKCKAES 267

Query: 245 GTLKGQVRISKTGAPGLRAKLYFPAICAKNHNPVVRAFCERLLARGKLPIVTVCAAMRKL 304
                  + +K G   L+      A+     NP  +A+  +L  R       + A   KL
Sbjct: 268 AGKAYGTQGNKIGNAHLKWAFSEAAVLFLKGNPPAQAYLAKLQKR-MSKAKALSALAHKL 326

Query: 305 LHLVWGVIHTNSLFDPD 321
              ++ ++   ++FD +
Sbjct: 327 GRCMYFMLKNQTVFDSE 343