Pairwise Alignments

Query, 462 a.a., TolC family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 9e-36
 Identities = 118/439 (26%), Positives = 196/439 (44%), Gaps = 26/439 (5%)

Query: 21  AQWRHAVTADPAPPTDL---HGWWHAFADPDLDALVDRALAHNLDVAQAVERLRAVRSLY 77
           AQ++HA     A P+D      WW  + D  L+ALV+     N  VAQ+  + R  ++L 
Sbjct: 52  AQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALV 111

Query: 78  KRAHARYLPELHARTHDSIDPDASASYLV--------------AGFDASWELGLFGRAEG 123
           + + A   P L   T  +     + S                 A    SWE+ L+G+   
Sbjct: 112 RSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRE 171

Query: 124 TRRESQGALDAGVADLQAARVSLVAEVVREWIGLRTAQQQEQLLQQISQQRRQAWELQQT 183
           T   ++ + +A  ADL + R+S  +E+V+ ++ LR   +Q++LL+       ++  + + 
Sbjct: 172 TLNANEASAEASFADLASIRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNEN 231

Query: 184 RQRLLLAAPGAVDQAQAAWARAEAALAAPRQAADASAQRLAVLLGQNHPDPAWLQAGTPP 243
           + R  +A P AV QA+      +A L             +AVLLG+   D A   +   P
Sbjct: 232 QYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQFENAIAVLLGKAPADFALADSKAIP 291

Query: 244 ELGAWRLDGTPAELLRTRPEIARAEADVLRSAGDLALAHAELFPNIGLGASMVWATDINN 303
            L    +   P++LL  RP+IA AE +V+ +  ++ ++ A  FP++ L  S  +++   +
Sbjct: 292 ALPQIPV-SLPSQLLERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFS 350

Query: 304 NRRFSTTPNAINSLGPVIDIPLFDWGMRLAAKHARDHELKASVLAYRQAVLQGVAEVETA 363
           N  +   PN   S+GP + + LFD G R A           +V  YRQ VL G  EVE  
Sbjct: 351 N--WIELPNRYWSVGPQLALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENL 408

Query: 364 LGGLEQQRRREQQETLAWQALQRADQAVQVRNKLQLDSPLDRTE---SWIAAEQAALELA 420
           L  L+           A  A + + +  + + +  L   LD      + ++ E++ L L 
Sbjct: 409 LVQLKVYGDEAVVRQEALDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLL 468

Query: 421 DARAAHSLAYVALFKALGG 439
             R   S+  VA   ALGG
Sbjct: 469 QGRLVASVQLVA---ALGG 484