Pairwise Alignments

Query, 194 a.a., RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 55.1 bits (131), Expect = 7e-13
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)

Query: 41  QLRHREDAMDAVQDAMLRLVRHYRDKPATEWAPLFWGILRRRVVDLQRRRKVRSIVVGWL 100
           +LR R+ A D   DA +R++   R++     A L     R   VD  RR   R  +    
Sbjct: 21  KLRSRQQAEDLTHDAFVRVLETPREQVEQPRAYLHQAA-RNIAVDGFRREDRRQAL---- 75

Query: 101 GGGRDDDGGELPAWEPADPGQ-DPLGRLHDVQSYAELVAAIRQLPQRQREAFMLRILEGL 159
                    E  A+E    G  DP   +H ++    +  A+ +LP   R+ F+ + LEGL
Sbjct: 76  ---------EREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126

Query: 160 DVAETARAMGCSEGSVKTHLSRAMHHLRDQLE 191
             AE A  MG S+  V+ ++ R + HLR+ L+
Sbjct: 127 TQAEIAERMGLSKNMVEKYMIRTLRHLREHLD 158