Pairwise Alignments

Query, 423 a.a., type II secretion system F family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 402 a.a., Type 4 fimbrial assembly protein PilC from Pseudomonas putida KT2440

 Score =  276 bits (706), Expect = 8e-79
 Identities = 158/394 (40%), Positives = 238/394 (60%), Gaps = 5/394 (1%)

Query: 28  YEWVALDKRGKRMKGDMPAKNATLVKAELRRQGMNPQTVRERAKPLFGSTGSTIKPGDVA 87
           Y W   D  G  + G  P ++   V+A L RQG+   ++R  A  L  S     +  D A
Sbjct: 8   YHWHGTDANGAPVSGQTPGRSPAYVRAGLIRQGITVASLRP-ASGLAFSLPKRREKADPA 66

Query: 88  IFSRQIATMMASGVPMIQAFDIIADGQKNIRFKNVLIDVKQNIEGGSSLHEALGRYPVQF 147
            FSRQ+AT++ +GVP++QAF+++     +     +L  +KQ++  G  L +AL R+P  F
Sbjct: 67  GFSRQLATLLKAGVPLLQAFEVMGRSGCDAAQAALLERLKQDVASGLGLADALQRHPAWF 126

Query: 148 DELYCNLVKAGEASGVLDTVLDTVATYKERTEAIKKKIKKALFYPMMVLAVVFIVVLIML 207
           D LYCNLV+ GE SG LD  L+ +A   E+   + KK++KA+ YP+++L     V  I+L
Sbjct: 127 DALYCNLVRVGEQSGTLDRQLEQLAGMLEQRRVLHKKVRKAMIYPLLLLLTGLGVSAILL 186

Query: 208 LFVVPVFAKTFQDAGAQLPAPTQLLVTASEFMQSY--WFIVVGLIGGGIAAIVIAKKRSV 265
           L V+P F   F   GA LPA TQ ++  S  +  +    +V+G++ G   A+    ++  
Sbjct: 187 LEVIPKFESMFSGMGAALPAFTQWVINLSTGLSRFAPLLLVMGVVMG--VAVRQLYRQHA 244

Query: 266 KFAHFLDRMSLKMPVMGSIVRNSAIARFARTLGVTFRAGVPLVEAMDAVAGATGSVVYGD 325
               ++ R  L +PV G ++  +A+ARFAR+L  ++ AGVPL++A+  VA  TG  ++  
Sbjct: 245 PARLWISRRVLGLPVFGKLLGQAALARFARSLATSYGAGVPLLDALGTVARVTGGDLHEQ 304

Query: 326 AVKQMRDDISVGHQLQLAMKQTGLFPNMVVQMTAIGEESGALDNMLFKVAEFYEEEVSNA 385
           AV ++R  ++ G  L  AM    LFP ++VQ+TAIGE SG LD ML K A  YEE+VS A
Sbjct: 305 AVLRLRQGMANGQGLNQAMAGEPLFPPLLVQLTAIGESSGTLDQMLEKAASHYEEQVSQA 364

Query: 386 VDTLSTLLEPIIMVVLGTLVGGMVVALYLPIFKL 419
           +D L++LLEP I+++LG LVGG+VVA+YLPIF+L
Sbjct: 365 LDQLTSLLEPAIVLILGLLVGGLVVAMYLPIFQL 398