Pairwise Alignments

Query, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

 Score =  323 bits (827), Expect = 5e-93
 Identities = 167/312 (53%), Positives = 216/312 (69%), Gaps = 2/312 (0%)

Query: 4   IRHEAEVPLGAAGRRFDQALAEMFPDYSRSRLSGWIKSGAVTLDGAPAPPRQLLRGGERV 63
           I   AEVP    G+R DQ  A++F ++SRSRLS WIK G +T+DGA   PR ++ GG  +
Sbjct: 5   IELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHGGAIL 64

Query: 64  QLRVELENEVASAAEDIALAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPR 123
           +L  E E +    A+DI L IV+ED+ +LV++KPAGLVVHP AG+  GTLLNALLHH P 
Sbjct: 65  ELTAEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPD 124

Query: 124 LAELPRAGIVHRLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLVAGGTV 183
           +  +PR GIVHRLDKDT+GLMVVA+T+   T LV  L    V R YE +V+G +VAGG +
Sbjct: 125 IINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVVAGGKI 184

Query: 184 DAPIGRSLGDRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCRLETGRTHQIRVHLAHI 243
           +APIGR    R R AV   E GK+AV+HYRV ERFR+H+ ++ +LETGRTHQIRVH+AHI
Sbjct: 185 NAPIGRHGQQRQRMAVM--EGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMAHI 242

Query: 244 SHPLVGDPLYGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAMSFGAERPA 303
           + PLVGDP YGG  ++P  ASA +  +L+ F RQALHA  L   HP +G+ MS+ +  P 
Sbjct: 243 NFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLPD 302

Query: 304 DQQRLIETLRAD 315
           D   L+  L+ D
Sbjct: 303 DLVWLLSLLKQD 314