Pairwise Alignments

Query, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score =  120 bits (300), Expect = 6e-32
 Identities = 103/317 (32%), Positives = 158/317 (49%), Gaps = 25/317 (7%)

Query: 9   EVPLGAAGRRFDQALAEMFPDYSRSRLSGWIKSGAVTLDGAPAPPRQLLRGGERVQL--- 65
           EV    AG+R D  L        ++ +   ++ G V ++     P   ++ G+ V++   
Sbjct: 15  EVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGDIVRVPPV 74

Query: 66  RVELENEVASAAEDIA----LAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHD 121
           R+   +E A  A+ +      AIV+ED+ L+V++KPAG+ VH G+G   G ++ AL    
Sbjct: 75  RLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFG-VIEALRQLR 133

Query: 122 PRLAELPRAGIVHRLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTL-VAG 180
           P   EL    +VHRLD+DTSGL+++A+       L   L    V+++Y A+V G    + 
Sbjct: 134 PDAKELE---LVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHWPTSK 190

Query: 181 GTVDAPIGRSLGDRLRQAVRDEEDGKRAVTHYRVRERFRAHS-LLQCRLETGRTHQIRVH 239
             V+AP+ +S      + V   E+GK A+T +RV  RF   + +++ R  TGRTHQIRVH
Sbjct: 191 KQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQIRVH 250

Query: 240 LAHISHPLVGDPLYGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHPATGEAMSFGA 299
             H  H + GD  YG      +  S E+     G +R  LHA  L    P  GE      
Sbjct: 251 TLHAGHMIAGDSKYG-----DEDFSREIREL--GGKRLFLHAYALTVPLPDGGE---LKL 300

Query: 300 ERPADQ--QRLIETLRA 314
           E P D+   + +E L A
Sbjct: 301 EAPVDEVWAKTVERLSA 317